RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 IPCEF1Q8WWN9 437 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 CAVIN3Q969G5 261 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 FUBP1Q96AE4 644 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 MSLNLQ96KJ4 702 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 OSBPL9Q96SU4 736 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 NELL2Q99435 816 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 ACTRT3Q9BYD9 372 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 SLC52A1Q9NWF4 448 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 TBC1D30Q9Y2I9 924 aa4.69□□□□□ -1.66
ECHDC1-217ENST00000488087 hCG_1984214I3L0E3 225 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 PEX1O43933 1283 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 MT-ND5P03915 603 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 HKR1P10072 659 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 SRGNP10124 158 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 CARSP49589 748 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 CASP5P51878 434 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 PRKAG1P54619 331 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 BLOC1S1P78537 153 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 ZXDAP98168 799 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 ZNF543Q08ER8 600 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 SCAPQ12770 1279 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 OS9Q13438 667 aaPredicted RBP4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 ICE2Q659A1 982 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 ZDHHC24Q6UX98 284 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 TSHZ1Q6ZSZ6 1077 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 UNC13DQ70J99 1090 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 GAS2L3Q86XJ1 694 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 ZNF280BQ86YH2 543 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 VRK3Q8IV63 474 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 YAF2Q8IY57 180 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 SAMD3Q8N6K7 520 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 SUPT20HQ8NEM7 779 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 LPIN2Q92539 896 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 FAM136AQ96C01 138 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 SNX22Q96L94 193 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 CCDC138Q96M89 665 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 MYD88Q99836 296 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 MESP1Q9BRJ9 268 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 AIFM2Q9BRQ8 373 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 PTDSS2Q9BVG9 487 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 BRIP1Q9BX63 1249 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 SERHLQ9NQF3 203 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 CHST12Q9NRB3 414 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 TBC1D23Q9NUY8 699 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 KCTD5Q9NXV2 234 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 SERTAD3Q9UJW9 196 aa4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 MRPS17Q9Y2R5 130 aaKnown RBP4.68□□□□□ -1.66
ECHDC1-217ENST00000488087 LOC102723971A0A1B0GUV8 181 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 H7C4K7 107 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 RAB27BO00194 218 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 YY2O15391 372 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 PPIFP30405 207 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 AVPR1BP47901 424 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 ITIH3Q06033 890 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 MYO1EQ12965 1108 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 E2F2Q14209 437 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 SLC29A2Q14542 456 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 INSCQ1MX18 579 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 KLHDC7AQ5VTJ3 777 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 CACHD1Q5VU97 1274 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 RGS7BPQ6MZT1 257 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 RNF44Q7L0R7 432 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 SRLQ86TD4 932 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 FAM186BQ8IYM0 893 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 Q8N1X5 172 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 LNX2Q8N448 690 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 ACRBPQ8NEB7 543 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 MYCBPAPQ8TBZ2 947 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 BPIFB1Q8TDL5 484 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 SMCR8Q8TEV9 937 aaPredicted RBP4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 LARP4BQ92615 738 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 IQCDQ96DY2 449 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 FBXL20Q96IG2 436 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 MPHOSPH6Q99547 160 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 AMBRA1Q9C0C7 1298 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 CHST8Q9H2A9 424 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 STARD7Q9NQZ5 370 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 ZNF212Q9UDV6 495 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 MID2Q9UJV3 735 aa4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 NDRG4Q9ULP0 352 aaKnown RBP4.67□□□□□ -1.66
ECHDC1-217ENST00000488087 TMEM191CA6NGB0 347 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 RASA4BC9J798 803 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 APOL1O14791 398 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 PPM1DO15297 605 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 RASA4O43374 803 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 THAP12O43422 761 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 RGS10O43665 173 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 RASAL1O95294 804 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 FSHBP01225 129 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 ANXA2P07355 339 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 TXNP10599 105 aaKnown RBP4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 IL1R1P14778 569 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 TSHRP16473 764 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 TNFSF4P23510 183 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 ACVR2AP27037 513 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 GDF5P43026 501 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 TM4SF4P48230 202 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 DGKEP52429 567 aa4.66□□□□□ -1.66
ECHDC1-217ENST00000488087 ITGA8P53708 1063 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms