RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 OSCP1Q8WVF1 389 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 MRPS31Q92665 395 aaKnown RBP11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 FAM212AQ96EL1 285 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 BICD1Q96G01 975 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 FNBP1Q96RU3 617 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 MMTAG2Q9BU76 263 aaKnown RBP11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 LINC00597Q9H2U6 94 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 SLC32A1Q9H598 525 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 TRPC7Q9HCX4 862 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 MBD1Q9UIS9 605 aaPredicted RBP11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 GPSM3Q9Y4H4 160 aa11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 ATXN2Q99700 1313 aaKnown RBP11.75□□□□□ -0.53
SMARCC1-205ENST00000483847 TCHHQ07283 1943 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 GON4LQ3T8J9 2241 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 NPHP3-ACAD11A0A0J9YXS1 232 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 CYB561D2O14569 222 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 OPRD1P41143 372 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 IFNAR2P48551 515 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 SMTNP53814 917 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 LMAN2Q12907 356 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 USP4Q13107 963 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 ANKRD1Q15327 319 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 SAFBQ15424 915 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 CRY1Q16526 586 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 ZC2HC1CQ53FD0 456 aaPredicted RBP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 EFCAB13Q8IY85 973 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 C2orf15Q8WU43 125 aaKnown RBP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 ATP2A3Q93084 1043 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 EXOC4Q96A65 974 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 PYM1Q9BRP8 204 aaKnown RBP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 PI4K2AQ9BTU6 479 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 NUSAP1Q9BXS6 441 aaKnown RBP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 RPF1Q9H9Y2 349 aaKnown RBP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 MMP17Q9ULZ9 603 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 ASH1LQ9NR48 2969 aaKnown RBP11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 CELSR3Q9NYQ7 3312 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 PI4KAP42356 2102 aa11.74□□□□□ -0.53
SMARCC1-205ENST00000483847 BPTFQ12830 3046 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 FAM221BA6H8Z2 402 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 OGTO15294 1046 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 PRPF40AO75400 957 aaKnown RBP11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 ZIC2O95409 532 aaPredicted RBP11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 CKMP06732 381 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 CHRM1P11229 460 aaPredicted RBP11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 P2RY2P41231 377 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 LIG4P49917 911 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 MESP2Q0VG99 397 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 DDR2Q16832 855 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 CCDC142Q17RM4 750 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 SLC39A4Q6P5W5 647 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 LPCAT2Q7L5N7 544 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 PDZD3Q86UT5 571 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 METTL23Q86XA0 190 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 SYT12Q8IV01 421 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 THEM5Q8N1Q8 247 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 COL26A1Q96A83 441 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 CPSF3Q9UKF6 684 aaKnown RBP11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 DSEQ9UL01 958 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 PCDHB5Q9Y5E4 795 aa11.73□□□□□ -0.53
SMARCC1-205ENST00000483847 HELZP42694 1942 aaKnown RBP11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 ANAPC1Q9H1A4 1944 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 A0A0B4J269 797 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 TNFRSF10BO14763 440 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 HNRNPDLO14979 420 aaKnown RBP11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 MAP3K13O43283 966 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 NOL4O94818 638 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 CFIP05156 583 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 USP17L7P0C7H9 530 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 CSH1P0DML2 217 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 CSH2P0DML3 217 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 ITPKAP23677 461 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 PAX3P23760 479 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 TOB1P50616 345 aaPredicted RBP11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 NCKAP1LP55160 1127 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 SMARCB1Q12824 385 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 TMEM132DQ14C87 1099 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 ZRSR1Q15695 479 aaKnown RBP11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 COL28A1Q2UY09 1125 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 KRT79Q5XKE5 535 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 SLC23A3Q6PIS1 610 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 RAB44Q7Z6P3 723 aaPredicted RBP11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 ALLCQ8N6M5 410 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 ARL14EPQ8N8R7 260 aaPredicted RBP11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 OR2I1PQ8NGU4 316 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 SH3RF2Q8TEC5 729 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 LRRC15Q8TF66 581 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 TSPAN18Q96SJ8 248 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 PLIN2Q99541 437 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 MSTO1Q9BUK6 570 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 GTPBP2Q9BX10 602 aaKnown RBP11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 FOXP1Q9H334 677 aaPredicted RBP11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 TMEM206Q9H813 350 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 ZDHHC4Q9NPG8 344 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 GCNT4Q9P109 453 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms