RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 FSD2A1L4K1 749 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 F8VZ95 297 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 FOXN3O00409 490 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-224ENST00000483359 SRGAP2BP0DMP2 458 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 PBX1P40424 430 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 SARM1Q6SZW1 724 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 SPPL2BQ8TCT7 592 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 JAKMIP2Q96AA8 810 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 FAM124BQ9H5Z6 455 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-224ENST00000483359 YIPF1Q9Y548 306 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 INSL5Q9Y5Q6 135 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 CYP26A1O43174 497 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 SSTR3P32745 418 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-224ENST00000483359 GPR15P49685 360 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 CTC1Q2NKJ3 1217 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 PPP1R26Q5T8A7 1209 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-224ENST00000483359 SDHAF4Q5VUM1 108 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 FAM35AQ86V20 835 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 FUKQ8N0W3 1084 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 STKLD1Q8NE28 680 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 CYFIP2Q96F07 1278 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 STK33Q9BYT3 514 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 PLEKHA4Q9H4M7 779 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 CLEC1BQ9P126 229 aa18.95■□□□□ 0.62
CPNE1-224ENST00000483359 MTCL1Q9Y4B5 1905 aaKnown RBP18.95■□□□□ 0.62
CPNE1-224ENST00000483359 H3BQ06 376 aaPredicted RBP18.94■□□□□ 0.62
CPNE1-224ENST00000483359 BRD2P25440 801 aaKnown RBP18.94■□□□□ 0.62
CPNE1-224ENST00000483359 LTBRP36941 435 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 ZNF132P52740 706 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 CACNA2D1P54289 1103 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 SMARCB1Q12824 385 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 PPM1LQ5SGD2 360 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 TMC5Q6UXY8 1006 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 CCDC149Q6ZUS6 474 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 SCN4BQ8IWT1 228 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 TCEAL8Q8IYN2 117 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 GPR152Q8TDT2 470 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 C2orf15Q8WU43 125 aaKnown RBP18.94■□□□□ 0.62
CPNE1-224ENST00000483359 DNAI2Q9GZS0 605 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 KRT82Q9NSB4 513 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 CEP72Q9P209 647 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 CDH22Q9UJ99 828 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 C5orf42Q9H799 3197 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 PTPRDP23468 1912 aa18.94■□□□□ 0.62
CPNE1-224ENST00000483359 CCL16O15467 120 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 KCNA5P22460 613 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 TWF1Q12792 350 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 CFAP221Q4G0U5 840 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 RARS2Q5T160 578 aaKnown RBP18.93■□□□□ 0.62
CPNE1-224ENST00000483359 ANKRD54Q6NXT1 300 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 PAQR9Q6ZVX9 377 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 TFAP2BQ92481 460 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 TMEM30AQ9NV96 361 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 DPP7Q9UHL4 492 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 CNTN6Q9UQ52 1028 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 NCK2O43639 380 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 ZMYND10O75800 440 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 GFPT2O94808 682 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 LRG1P02750 347 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 PAEPP09466 180 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 ATF6P18850 670 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 GNA15P30679 374 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 GRIK1P39086 918 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 JAM2P57087 298 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 DDR2Q16832 855 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 SGO2Q562F6 1265 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 ELMSAN1Q6PJG2 1045 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 TMEM184AQ6ZMB5 413 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 CPLX3Q8WVH0 158 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 FUBP3Q96I24 572 aaKnown RBP eCLIP18.93■□□□□ 0.62
CPNE1-224ENST00000483359 UBE2ZQ9H832 354 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-224ENST00000483359 SFXN1Q9H9B4 322 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 PRDM6Q9NQX0 595 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 DZANK1Q9NVP4 752 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 BRWD1Q9NSI6 2320 aa18.93■□□□□ 0.62
CPNE1-224ENST00000483359 CCDC195A0A1B0GUA6 201 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 HAPLN1P10915 354 aaPredicted RBP18.92■□□□□ 0.62
CPNE1-224ENST00000483359 ARID5AQ03989 594 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 COL19A1Q14993 1142 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 GOLGA7BQ2TAP0 167 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 SLC47A2Q86VL8 602 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 ZSWIM1Q9BR11 485 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 ABCB6Q9NP58 842 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 TSPAN16Q9UKR8 245 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 THAP12O43422 761 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 AP1G2O75843 785 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 VDRP11473 427 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 CLCN1P35523 988 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 ALDH1A3P47895 512 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 UVSSAQ2YD98 709 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 SYCE2Q6PIF2 218 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 FAM71AQ8IYT1 594 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 GIPC2Q8TF65 315 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 SMARCD1Q96GM5 515 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 KCNK16Q96T55 309 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 HNRNPABQ99729 332 aaKnown RBP18.92■□□□□ 0.62
CPNE1-224ENST00000483359 TTYH3Q9C0H2 523 aa18.92■□□□□ 0.62
CPNE1-224ENST00000483359 ATP8B3O60423 1300 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 LRRC53A6NM62 1247 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 F8VP50 259 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms