RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 IPPQ9Y573 584 aa7.21□□□□□ -1.26
CHD6-209ENST00000482596 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.21□□□□□ -1.26
CHD6-209ENST00000482596 A0A1B0GVT2 93 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 FIGNL2A6NMB9 653 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 H3BM21 787 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 MEIS2O14770 477 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 RNF113AO15541 343 aaKnown RBP7.2□□□□□ -1.26
CHD6-209ENST00000482596 MTSS1O43312 755 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 KLF8O95600 359 aaPredicted RBP7.2□□□□□ -1.26
CHD6-209ENST00000482596 PARP1P09874 1014 aaKnown RBP7.2□□□□□ -1.26
CHD6-209ENST00000482596 SFTPCP11686 197 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 ATF2P15336 505 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 FGFR3P22607 806 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 HOXA11P31270 313 aaPredicted RBP7.2□□□□□ -1.26
CHD6-209ENST00000482596 ARPP19P56211 112 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 GABREP78334 506 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 SRSF6Q13247 344 aaKnown RBP7.2□□□□□ -1.26
CHD6-209ENST00000482596 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.2□□□□□ -1.268e-8■■■■■ 36.6
CHD6-209ENST00000482596 GPR158Q5T848 1215 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 FHL5Q5TD97 284 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 GAREM2Q75VX8 874 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 DCBLD1Q8N8Z6 715 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 IL17RCQ8NAC3 791 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 PIGSQ96S52 555 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 ZNF395Q9H8N7 513 aaPredicted RBP7.2□□□□□ -1.26
CHD6-209ENST00000482596 LY9Q9HBG7 655 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 THG1LQ9NWX6 298 aaKnown RBP7.2□□□□□ -1.26
CHD6-209ENST00000482596 KLK14Q9P0G3 267 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 CALCOCO1Q9P1Z2 691 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 ANAPC4Q9UJX5 808 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 CLCA2Q9UQC9 943 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 CCL26Q9Y258 94 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 NFASCO94856 1347 aa7.2□□□□□ -1.26
CHD6-209ENST00000482596 ARHGEF17Q96PE2 2063 aaPredicted RBP7.2□□□□□ -1.26
CHD6-209ENST00000482596 A0A087X0B3 334 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 ZNF213O14771 459 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 N4BP3O15049 544 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 ADAM23O75077 832 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 GABRG2P18507 467 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 AKAP5P24588 427 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 TKTP29401 623 aaKnown RBP7.19□□□□□ -1.26
CHD6-209ENST00000482596 ADRA1BP35368 520 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 CD97P48960 835 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 CDR1P51861 262 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 ERVPABLB-1P60509 514 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 INSM1Q01101 510 aaPredicted RBP7.19□□□□□ -1.26
CHD6-209ENST00000482596 CLN3Q13286 438 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 TBR1Q16650 682 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 SYCP2LQ5T4T6 812 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 EMC10Q5UCC4 262 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 TSHZ3Q63HK5 1081 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 ERC1Q8IUD2 1116 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 LEMD2Q8NC56 503 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 ACAP3Q96P50 834 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 INSM2Q96T92 566 aaPredicted RBP7.19□□□□□ -1.26
CHD6-209ENST00000482596 SDF4Q9BRK5 362 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 MIR1-1HGQ9H1L0 117 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 MINDY3Q9H8M7 445 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 GDPD2Q9HCC8 539 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 UBN1Q9NPG3 1134 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 DONSONQ9NYP3 566 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 TPCN1Q9ULQ1 816 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 BACE2Q9Y5Z0 518 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 SLCO1B1Q9Y6L6 691 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 UBE4BO95155 1302 aa7.19□□□□□ -1.26
CHD6-209ENST00000482596 CCER2I3L3R5 266 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 I3L4J1 428 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 C1SP09871 688 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 PTGIRP43119 386 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 CTSOP43234 321 aaPredicted RBP7.18□□□□□ -1.26
CHD6-209ENST00000482596 INHBCP55103 352 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 CYP4F8P98187 520 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 AMPD2Q01433 879 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 MESP2Q0VG99 397 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 KIF19Q2TAC6 998 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 WDR45BQ5MNZ6 344 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 SLC8B1Q6J4K2 584 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 IL27RAQ6UWB1 636 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 USP53Q70EK8 1073 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 GATAD2AQ86YP4 633 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 CLASRPQ8N2M8 674 aaKnown RBP7.18□□□□□ -1.26
CHD6-209ENST00000482596 KBTBD3Q8NAB2 608 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 ENGASEQ8NFI3 743 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 ERLEC1Q96DZ1 483 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 CNDP2Q96KP4 475 aaKnown RBP7.18□□□□□ -1.26
CHD6-209ENST00000482596 CCNL2Q96S94 520 aaPredicted RBP7.18□□□□□ -1.26
CHD6-209ENST00000482596 DNAJC25Q9H1X3 360 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 NXF3Q9H4D5 531 aaKnown RBP7.18□□□□□ -1.26
CHD6-209ENST00000482596 ECT2Q9H8V3 914 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 GEMIN8Q9NWZ8 242 aaKnown RBP7.18□□□□□ -1.26
CHD6-209ENST00000482596 MAFBQ9Y5Q3 323 aaPredicted RBP7.18□□□□□ -1.26
CHD6-209ENST00000482596 SNX11Q9Y5W9 270 aa7.18□□□□□ -1.26
CHD6-209ENST00000482596 DENND4CQ5VZ89 1909 aa7.17□□□□□ -1.26
CHD6-209ENST00000482596 KLRF2D3W0D1 207 aa7.17□□□□□ -1.26
CHD6-209ENST00000482596 H0Y8X5 98 aa7.17□□□□□ -1.26
CHD6-209ENST00000482596 MAFGO15525 162 aa7.17□□□□□ -1.26
CHD6-209ENST00000482596 WIPF1O43516 503 aa7.17□□□□□ -1.26
CHD6-209ENST00000482596 LDOC1O95751 146 aaPredicted RBP7.17□□□□□ -1.26
CHD6-209ENST00000482596 GNLYP22749 145 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms