RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ALDH1A3P47895 512 aa21■□□□□ 0.95
LIME1-205ENST00000480139 RAD23BP54727 409 aa21■□□□□ 0.95
LIME1-205ENST00000480139 CYP27A1Q02318 531 aa21■□□□□ 0.95
LIME1-205ENST00000480139 TWF1Q12792 350 aa21■□□□□ 0.95
LIME1-205ENST00000480139 ATAT1Q5SQI0 421 aa21■□□□□ 0.95
LIME1-205ENST00000480139 DPY19L2P1Q6NXN4 242 aa21■□□□□ 0.95
LIME1-205ENST00000480139 RRAGAQ7L523 313 aa21■□□□□ 0.95
LIME1-205ENST00000480139 SMG7Q92540 1137 aaKnown RBP21■□□□□ 0.95
LIME1-205ENST00000480139 CEP295NLQ96MC4 621 aa21■□□□□ 0.95
LIME1-205ENST00000480139 KREMEN1Q96MU8 473 aa21■□□□□ 0.95
LIME1-205ENST00000480139 SEPT5Q99719 369 aaPredicted RBP21■□□□□ 0.95
LIME1-205ENST00000480139 APOL5Q9BWW9 433 aa21■□□□□ 0.95
LIME1-205ENST00000480139 ELOVL4Q9GZR5 314 aa21■□□□□ 0.95
LIME1-205ENST00000480139 UBE2TQ9NPD8 197 aaPredicted RBP21■□□□□ 0.95
LIME1-205ENST00000480139 PLCB1Q9NQ66 1216 aa21■□□□□ 0.95
LIME1-205ENST00000480139 CNTN6Q9UQ52 1028 aa21■□□□□ 0.95
LIME1-205ENST00000480139 SLC27A5Q9Y2P5 690 aa21■□□□□ 0.95
LIME1-205ENST00000480139 ASB3Q9Y575 518 aa21■□□□□ 0.95
LIME1-205ENST00000480139 ATP8B3O60423 1300 aa21■□□□□ 0.95
LIME1-205ENST00000480139 EPHB3P54753 998 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 MFAP3P55082 362 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 RPL10AP62906 217 aaKnown RBP20.99■□□□□ 0.95
LIME1-205ENST00000480139 CBX2Q14781 532 aaPredicted RBP20.99■□□□□ 0.95
LIME1-205ENST00000480139 MGAT5BQ3V5L5 792 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.99■□□□□ 0.95
LIME1-205ENST00000480139 ELMOD1Q8N336 334 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 SLC4A11Q8NBS3 891 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 KAT5Q92993 513 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 TMEM176AQ96HP8 235 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 ASB2Q96Q27 587 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 ERGIC2Q96RQ1 377 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 B3GNT5Q9BYG0 378 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 DAAM1Q9Y4D1 1078 aa20.99■□□□□ 0.95
LIME1-205ENST00000480139 CCL16O15467 120 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 ATF6P18850 670 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 CYP2F1P24903 491 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 ORC1Q13415 861 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 FILIP1LQ4L180 1135 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 FUKQ8N0W3 1084 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 LPIN3Q9BQK8 851 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 PIDD1Q9HB75 910 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 RTN4Q9NQC3 1192 aaKnown RBP20.98■□□□□ 0.95
LIME1-205ENST00000480139 AVENQ9NQS1 362 aaPredicted RBP20.98■□□□□ 0.95
LIME1-205ENST00000480139 CEP72Q9P209 647 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 KIAA1257Q9ULG3 409 aa20.98■□□□□ 0.95
LIME1-205ENST00000480139 A0A1B0GTH6 734 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 TRIM66O15016 1216 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 PAEPP09466 180 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 KCNQ1P51787 676 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 ZNF132P52740 706 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 UBXN1Q04323 297 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 ZNF394Q53GI3 561 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 KLHDC7AQ5VTJ3 777 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 TMEM270Q6UE05 265 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 PAQR9Q6ZVX9 377 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 ITIH5Q86UX2 942 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 FAM35AQ86V20 835 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 C12orf29Q8N999 325 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 LEMD2Q8NC56 503 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 FEZF2Q8TBJ5 459 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 PSMG2Q969U7 264 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 SMARCD1Q96GM5 515 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 HNRNPABQ99729 332 aaKnown RBP20.97■□□□□ 0.95
LIME1-205ENST00000480139 WDR6Q9NNW5 1121 aaKnown RBP20.97■□□□□ 0.95
LIME1-205ENST00000480139 SIK3Q9Y2K2 1263 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 PCDHB4Q9Y5E5 795 aa20.97■□□□□ 0.95
LIME1-205ENST00000480139 SOAT2O75908 522 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 PTPN2P17706 415 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 BDNFP23560 247 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 EPHA5P54756 1037 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 APBA1Q02410 837 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 VEPH1Q14D04 833 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 ARHGAP17Q68EM7 881 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 IQCEQ6IPM2 695 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 GJB7Q6PEY0 223 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 SLC2A14Q8TDB8 520 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 SHC3Q92529 594 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 CYFIP2Q96F07 1278 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 SPATA17Q96L03 361 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 C8orf48Q96LL4 319 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 ZNF512Q96ME7 567 aaPredicted RBP20.96■□□□□ 0.95
LIME1-205ENST00000480139 HEXIM2Q96MH2 286 aaKnown RBP20.96■□□□□ 0.95
LIME1-205ENST00000480139 LSM14BQ9BX40 385 aaKnown RBP20.96■□□□□ 0.95
LIME1-205ENST00000480139 NAA15Q9BXJ9 866 aaKnown RBP20.96■□□□□ 0.95
LIME1-205ENST00000480139 ZNF518BQ9C0D4 1074 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 POMKQ9H5K3 350 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 DNMT3BQ9UBC3 853 aaKnown RBP20.96■□□□□ 0.95
LIME1-205ENST00000480139 CDH22Q9UJ99 828 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 DNAJC12Q9UKB3 198 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 PATJQ8NI35 1801 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 CLUHO75153 1309 aa20.96■□□□□ 0.95
LIME1-205ENST00000480139 NOTCH4Q99466 2003 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 CLDN5O00501 218 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 SERPINC1P01008 464 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 BMP1P13497 986 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 CCDC130P13994 396 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 IL9P15248 144 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 UCHL3P15374 230 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 CDR1P51861 262 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 SYCP1Q15431 976 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms