RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 ZNF541Q9H0D2 1346 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 F8W735 103 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-215ENST00000476664 PPP1R11O60927 126 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-215ENST00000476664 ACTL6BO94805 426 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 CELF2O95319 508 aaKnown RBP7.57□□□□□ -1.2
LRCH3-215ENST00000476664 A1BGP04217 495 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 SYN1P17600 705 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 AMPD1P23109 780 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 PSMA3P25788 255 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 GABRB3P28472 473 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 AP2B1P63010 937 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 TEKQ02763 1124 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 SLC13A2Q13183 592 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 SNAPC2Q13487 334 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 RAB32Q13637 225 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 EIF4A2Q14240 407 aaKnown RBP7.57□□□□□ -1.2
LRCH3-215ENST00000476664 BBS12Q6ZW61 710 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 UNC13DQ70J99 1090 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 AGGF1Q8N302 714 aaeCLIP7.57□□□□□ -1.2
LRCH3-215ENST00000476664 GALNT6Q8NCL4 622 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 MSANTD4Q8NCY6 345 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 OR6Y1Q8NGX8 325 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 TMX3Q96JJ7 454 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 P2RX7Q99572 595 aaKnown RBP7.57□□□□□ -1.2
LRCH3-215ENST00000476664 SEZ6LQ9BYH1 1024 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 TAOK3Q9H2K8 898 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 DBNDD1Q9H9R9 158 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 MLXIPQ9HAP2 919 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 CD248Q9HCU0 757 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 DIAPH3Q9NSV4 1193 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 SRRDQ9UH36 339 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 ZNF112Q9UJU3 913 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 SCAF8Q9UPN6 1271 aaKnown RBP7.57□□□□□ -1.2
LRCH3-215ENST00000476664 PCDHB4Q9Y5E5 795 aa7.57□□□□□ -1.2
LRCH3-215ENST00000476664 RGPD2P0DJD1 1756 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TRIM64A6NGJ6 449 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TRIM64BA6NI03 449 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 POLRMTO00411 1230 aaKnown RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 BTN3A1O00481 513 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 FCHO1O14526 889 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TERTO14746 1132 aaKnown RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 HNRNPA1P09651 372 aaKnown RBP eCLIP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 MUTP22033 750 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 RPL10P27635 214 aaKnown RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 FLT3LGP49771 235 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 CCR9P51686 369 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 COPAP53621 1224 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 SNX16P57768 344 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TLE1Q04724 770 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TARDBPQ13148 414 aaKnown RBP eCLIP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 CUL4BQ13620 913 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 NOLC1Q14978 699 aaKnown RBP eCLIP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 WTAPQ15007 396 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TARBP2Q15633 366 aaKnown RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 FLYWCH1Q4VC44 716 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 SGO2Q562F6 1265 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 EMC10Q5UCC4 262 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 USP17L6PQ6QN14 398 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TMTC3Q6ZXV5 915 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 CHD1LQ86WJ1 897 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 HSCBQ8IWL3 235 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TRMT2AQ8IZ69 625 aaKnown RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 CELF5Q8N6W0 485 aaKnown RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 VGLL2Q8N8G2 317 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TTLL11Q8NHH1 800 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 CEP70Q8NHQ1 597 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 CYFIP2Q96F07 1278 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 NEIL1Q96FI4 390 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 HEXIM2Q96MH2 286 aaKnown RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 TWNKQ96RR1 684 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 PDCL3Q9H2J4 239 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 PABPC3Q9H361 631 aaKnown RBP7.56□□□□□ -1.2
LRCH3-215ENST00000476664 NOD2Q9HC29 1040 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 INCENPQ9NQS7 918 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 ATP8A2Q9NTI2 1148 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 PI4KBQ9UBF8 816 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 MED16Q9Y2X0 877 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 PIEZO1Q92508 2521 aa7.56□□□□□ -1.2
LRCH3-215ENST00000476664 A0A0A6YYJ9 748 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 FAM95CA0A1B0GW59 222 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 ACOT7O00154 380 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 GTPBP1O00178 669 aaKnown RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 AKR1B10O60218 316 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 PHF2O75151 1096 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 PTP4A3O75365 173 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 HSPA4LO95757 839 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 ACADMP11310 421 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 JUPP14923 745 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 NPPBP16860 134 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 RXRAP19793 462 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 KCNJ5P48544 419 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 SEC24CP53992 1094 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 SOX8P57073 446 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 ZNF200P98182 395 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 MEF2AQ02078 507 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 BECN1Q14457 450 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms