RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NDST4Q9H3R1 872 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 MFSD1Q9H3U5 465 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 INTS13Q9NVM9 706 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 GDAP2Q9NXN4 497 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 HSPBP1Q9NZL4 362 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 ITGA11Q9UKX5 1188 aa16.73■□□□□ 0.27
CPSF3-203ENST00000475482 PTPRJQ12913 1337 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 ITGB3P05106 788 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 FCARP24071 287 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 SMARCB1Q12824 385 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 SURF1Q15526 300 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 CYP4A22Q5TCH4 519 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 PDZD4Q76G19 769 aaPredicted RBP16.72■□□□□ 0.27
CPSF3-203ENST00000475482 LIMS2Q7Z4I7 341 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 LRRTM3Q86VH5 581 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 TRIM59Q8IWR1 403 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 CCDC150Q8NCX0 1101 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 SPATA18Q8TC71 538 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 ELSPBP1Q96BH3 223 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 FAM84AQ96KN4 292 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 NUP58Q9BVL2 599 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 AGAP1Q9UPQ3 857 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 ASB3Q9Y575 518 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 DENND4CQ5VZ89 1909 aa16.72■□□□□ 0.27
CPSF3-203ENST00000475482 AKAP3O75969 853 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 STARD6P59095 220 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 RBP5P82980 135 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 ENPEPQ07075 957 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 TANGO2Q6ICL3 276 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 INTS8Q75QN2 995 aaKnown RBP16.71■□□□□ 0.27
CPSF3-203ENST00000475482 METTL23Q86XA0 190 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 THEM5Q8N1Q8 247 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 PDCL2Q8N4E4 241 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 TTC9BQ8N6N2 239 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 FLCNQ8NFG4 579 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 OR5B17Q8NGF7 314 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 C2orf15Q8WU43 125 aaKnown RBP16.71■□□□□ 0.27
CPSF3-203ENST00000475482 ASB16Q96NS5 453 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 KXD1Q9BQD3 176 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 DDX23Q9BUQ8 820 aaKnown RBP16.71■□□□□ 0.27
CPSF3-203ENST00000475482 PLA2G2FQ9BZM2 168 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 MTMR12Q9C0I1 747 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 TRPV4Q9HBA0 871 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 ASAH2Q9NR71 780 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 ARHGEF3Q9NR81 526 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 CA14Q9ULX7 337 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 L1RE1Q9UN81 338 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 SLC27A5Q9Y2P5 690 aa16.71■□□□□ 0.27
CPSF3-203ENST00000475482 CACNA1IQ9P0X4 2223 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 GABRDO14764 452 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 TEX33O43247 280 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 STX10O60499 249 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 ALDH1A3P47895 512 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 TUFMP49411 452 aaKnown RBP16.7■□□□□ 0.26
CPSF3-203ENST00000475482 EPHB3P54753 998 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 SNRNP35Q16560 246 aaKnown RBP16.7■□□□□ 0.26
CPSF3-203ENST00000475482 FAM78AQ5JUQ0 283 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 MIIPQ5JXC2 388 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 CCDC186Q7Z3E2 898 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 WDR49Q8IV35 697 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 SHKBP1Q8TBC3 707 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 PSMG2Q969U7 264 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 ZSWIM3Q96MP5 696 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 ERGIC2Q96RQ1 377 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 PKMYT1Q99640 499 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 IRF2BPLQ9H1B7 796 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 TBC1D17Q9HA65 648 aa16.7■□□□□ 0.26
CPSF3-203ENST00000475482 MIA3Q5JRA6 1907 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 AFPP02771 609 aaKnown RBP16.69■□□□□ 0.26
CPSF3-203ENST00000475482 TMEM191BP0C7N4 346 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 ATF6P18850 670 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 PBX1P40424 430 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 PSMD6Q15008 389 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 DUOXA2Q1HG44 320 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 SLC39A12Q504Y0 691 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 TCERG1LQ5VWI1 586 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 DPH6Q7L8W6 267 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 DNAJB7Q7Z6W7 309 aaPredicted RBP16.69■□□□□ 0.26
CPSF3-203ENST00000475482 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 TMEM86AQ8N2M4 240 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 TOP6BLQ8N6T0 577 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 SPPL2BQ8TCT7 592 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 SMARCD2Q92925 531 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 ANKRD36BP1Q96IX9 119 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 PCMTD1Q96MG8 357 aaPredicted RBP16.69■□□□□ 0.26
CPSF3-203ENST00000475482 ACBD6Q9BR61 282 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 GPR88Q9GZN0 384 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 DLGAP2Q9P1A6 1054 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 COL4A2P08572 1712 aa16.69■□□□□ 0.26
CPSF3-203ENST00000475482 NUP210Q8TEM1 1887 aaPredicted RBP16.69■□□□□ 0.26
CPSF3-203ENST00000475482 SOAT2O75908 522 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 HAPLN1P10915 354 aaPredicted RBP16.68■□□□□ 0.26
CPSF3-203ENST00000475482 MYL4P12829 197 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 GJA1P17302 382 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 CASP4P49662 377 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 PFKPQ01813 784 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 PRKCQQ04759 706 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 CYP24A1Q07973 514 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 CETN1Q12798 172 aa16.68■□□□□ 0.26
CPSF3-203ENST00000475482 KCNH2Q12809 1159 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms