RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 DNAI2Q9GZS0 605 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 ADAM7Q9H2U9 754 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 FAM49BQ9NUQ9 324 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 THEGQ9P2T0 379 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 HSFX1Q9UBD0 423 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 CDH22Q9UJ99 828 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 DNAJC12Q9UKB3 198 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 SIK3Q9Y2K2 1263 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 YIPF1Q9Y548 306 aa19.29■□□□□ 0.68
SNRPB-203ENST00000474384 CLDN5O00501 218 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 HNRNPA1P09651 372 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNRPB-203ENST00000474384 CCDC130P13994 396 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 TRIM21P19474 475 aaKnown RBP19.28■□□□□ 0.68
SNRPB-203ENST00000474384 BDNFP23560 247 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 ALDH1A3P47895 512 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 TUFMP49411 452 aaKnown RBP19.28■□□□□ 0.68
SNRPB-203ENST00000474384 ITIH3Q06033 890 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 CFAP221Q4G0U5 840 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 IQCEQ6IPM2 695 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 CES5AQ6NT32 575 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 ENOSF1Q7L5Y1 443 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 GPR149Q86SP6 731 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 SMRP1Q8NCR6 262 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.28■□□□□ 0.68
SNRPB-203ENST00000474384 JAKMIP2Q96AA8 810 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 FUBP3Q96I24 572 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNRPB-203ENST00000474384 FAM81BQ96LP2 452 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 ERGIC2Q96RQ1 377 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 MED10Q9BTT4 135 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 ZNF518BQ9C0D4 1074 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 ABCB6Q9NP58 842 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 PLCB1Q9NQ66 1216 aa19.28■□□□□ 0.68
SNRPB-203ENST00000474384 FAM207AQ9NSI2 230 aaPredicted RBP19.28■□□□□ 0.68
SNRPB-203ENST00000474384 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.68
SNRPB-203ENST00000474384 GRXCR2A6NFK2 248 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 RNF225M0QZC1 329 aaPredicted RBP19.27■□□□□ 0.68
SNRPB-203ENST00000474384 KRT5P13647 590 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 HOXA9P31269 272 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 GPR15P49685 360 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 UBASH3AP57075 661 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 NR1I3Q14994 352 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 PAQR9Q6ZVX9 377 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 GAS2L3Q86XJ1 694 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 SCN4BQ8IWT1 228 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 FUKQ8N0W3 1084 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 SLC2A14Q8TDB8 520 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 SMG7Q92540 1137 aaKnown RBP19.27■□□□□ 0.68
SNRPB-203ENST00000474384 CYFIP2Q96F07 1278 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 RBSNQ9H1K0 784 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 PIDD1Q9HB75 910 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 FHOD1Q9Y613 1164 aa19.27■□□□□ 0.68
SNRPB-203ENST00000474384 C5orf42Q9H799 3197 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 MBTPS2O43462 519 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 XYLBO75191 536 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 NOL4O94818 638 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 PAPLNO95428 1278 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 UCHL3P15374 230 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 ATF6P18850 670 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 ADORA2BP29275 332 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 MAGEA11P43364 429 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 PLD1Q13393 1074 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 SMAD4Q13485 552 aaKnown RBP19.26■□□□□ 0.67
SNRPB-203ENST00000474384 DDR2Q16832 855 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 ATAT1Q5SQI0 421 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 SDHAF4Q5VUM1 108 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 RBBP8NLQ8NC74 664 aaPredicted RBP19.26■□□□□ 0.67
SNRPB-203ENST00000474384 GPR152Q8TDT2 470 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 GIPC2Q8TF65 315 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 HNRNPABQ99729 332 aaKnown RBP19.26■□□□□ 0.67
SNRPB-203ENST00000474384 ANP32EQ9BTT0 268 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 NAA15Q9BXJ9 866 aaKnown RBP19.26■□□□□ 0.67
SNRPB-203ENST00000474384 GANQ9H2C0 597 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 IFNKQ9P0W0 207 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 CEP72Q9P209 647 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 CNTN6Q9UQ52 1028 aa19.26■□□□□ 0.67
SNRPB-203ENST00000474384 USP15Q9Y4E8 981 aaPredicted RBP19.26■□□□□ 0.67
SNRPB-203ENST00000474384 EPHB6O15197 1021 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 CALCAP01258 141 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 CD19P15391 556 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 GRIK1P39086 918 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 USP8P40818 1118 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 ZNF132P52740 706 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 CACNA2D1P54289 1103 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 EPHB3P54753 998 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 RPL10AP62906 217 aaKnown RBP19.25■□□□□ 0.67
SNRPB-203ENST00000474384 RAPGEF1Q13905 1077 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 PPP1R26Q5T8A7 1209 aaPredicted RBP19.25■□□□□ 0.67
SNRPB-203ENST00000474384 PTCRAQ6ISU1 281 aaPredicted RBP19.25■□□□□ 0.67
SNRPB-203ENST00000474384 VSTM1Q6UX27 236 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 GRASPQ7Z6J2 395 aaPredicted RBP19.25■□□□□ 0.67
SNRPB-203ENST00000474384 FAM35AQ86V20 835 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 NEK11Q8NG66 645 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 SHC3Q92529 594 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 ZNF512Q96ME7 567 aaPredicted RBP19.25■□□□□ 0.67
SNRPB-203ENST00000474384 HCFC1R1Q9NWW0 138 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 ATP8B3O60423 1300 aa19.25■□□□□ 0.67
SNRPB-203ENST00000474384 PTPRDP23468 1912 aa19.24■□□□□ 0.67
SNRPB-203ENST00000474384 FOXN3O00409 490 aaPredicted RBP19.24■□□□□ 0.67
SNRPB-203ENST00000474384 POU2F2P09086 479 aa19.24■□□□□ 0.67
SNRPB-203ENST00000474384 PAEPP09466 180 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms