RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DERAQ9Y315 318 aa9.84□□□□□ -0.83
SMC4-213ENST00000472282 C2CD2Q9Y426 696 aa9.84□□□□□ -0.83
SMC4-213ENST00000472282 NUP210Q8TEM1 1887 aaPredicted RBP9.84□□□□□ -0.83
SMC4-213ENST00000472282 MYH10P35580 1976 aa9.84□□□□□ -0.83
SMC4-213ENST00000472282 PTPRJQ12913 1337 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 ZNF638Q14966 1978 aaKnown RBP9.83□□□□□ -0.84
SMC4-213ENST00000472282 BICDL2A1A5D9 508 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 SYN3O14994 580 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 CETN3O15182 167 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 TRAPPC3O43617 180 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 ABLIM3O94929 683 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 VNN2O95498 520 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 TMEM191BP0C7N4 346 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 DLATP10515 647 aaKnown RBP9.83□□□□□ -0.84
SMC4-213ENST00000472282 SRFP11831 508 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 AOC1P19801 751 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 RPL9P32969 192 aaKnown RBP9.83□□□□□ -0.84
SMC4-213ENST00000472282 CLCN5P51795 746 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 TFAMQ00059 246 aaKnown RBP9.83□□□□□ -0.84
SMC4-213ENST00000472282 ADAM9Q13443 819 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 MYBPC2Q14324 1141 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 PSMD6Q15008 389 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 SURF1Q15526 300 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 NFKBIBQ15653 356 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 SPATA1Q5VX52 437 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 TTI2Q6NXR4 508 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 NT5DC4Q86YG4 428 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 ZC3H3Q8IXZ2 948 aaKnown RBP9.83□□□□□ -0.84
SMC4-213ENST00000472282 FAM186BQ8IYM0 893 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 MLKLQ8NB16 471 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 BEST2Q8NFU1 509 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 ZNF461Q8TAF7 563 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 PLEKHO2Q8TD55 490 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 TMEM174Q8WUU8 243 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 CCDC127Q96BQ5 260 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 FNBP1Q96RU3 617 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 TSPAN18Q96SJ8 248 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 PRRX2Q99811 253 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 MTMR12Q9C0I1 747 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.83□□□□□ -0.842e-7■■■■□ 26.2
SMC4-213ENST00000472282 WNT16Q9UBV4 365 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 FBXL21Q9UKT6 434 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 CDH7Q9ULB5 785 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 FRMD4BQ9Y2L6 1034 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 NUB1Q9Y5A7 615 aa9.83□□□□□ -0.84
SMC4-213ENST00000472282 TIMM13Q9Y5L4 95 aaPredicted RBP9.83□□□□□ -0.84
SMC4-213ENST00000472282 ARHGEF37A1IGU5 675 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 LRRN2O75325 713 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 AKAP3O75969 853 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 POU2F2P09086 479 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 OR4Q2P0C623 313 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 EPB41P11171 864 aaKnown RBP9.82□□□□□ -0.84
SMC4-213ENST00000472282 TNNI1P19237 187 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 CYP3A5P20815 502 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 LRPAP1P30533 357 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 PSMC2P35998 433 aaKnown RBP9.82□□□□□ -0.84
SMC4-213ENST00000472282 CCR2P41597 374 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 GPC5P78333 572 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 FKBP3Q00688 224 aaKnown RBP9.82□□□□□ -0.84
SMC4-213ENST00000472282 UVSSAQ2YD98 709 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 CTXN3Q4LDR2 81 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 PABPC1LQ4VXU2 614 aaKnown RBP9.82□□□□□ -0.84
SMC4-213ENST00000472282 SASS6Q6UVJ0 657 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 WDR49Q8IV35 697 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 OR5B17Q8NGF7 314 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 ATOH1Q92858 354 aaPredicted RBP9.82□□□□□ -0.84
SMC4-213ENST00000472282 TCEAL4Q96EI5 215 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 ANKRD36BP1Q96IX9 119 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 CGRRF1Q99675 332 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 DUSP9Q99956 384 aaKnown RBP9.82□□□□□ -0.84
SMC4-213ENST00000472282 KXD1Q9BQD3 176 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 ARHGAP9Q9BRR9 750 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 MKNK1Q9BUB5 465 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 PLA2G2FQ9BZM2 168 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 GZF1Q9H116 711 aaPredicted RBP9.82□□□□□ -0.84
SMC4-213ENST00000472282 CRISPLD1Q9H336 500 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 INTS13Q9NVM9 706 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 DPP3Q9NY33 737 aa9.82□□□□□ -0.84
SMC4-213ENST00000472282 TTLL8A6PVC2 850 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 LRRIQ3A6PVS8 624 aaPredicted RBP9.81□□□□□ -0.84
SMC4-213ENST00000472282 M0QZQ0 153 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 MAPK13O15264 365 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 XYLBO75191 536 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 TNNC2P02585 160 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 ITGB3P05106 788 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 RHOP08100 348 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 TRIM49P0CI25 452 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 TRIM49CP0CI26 452 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 KRT13P13646 458 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 ATF2P15336 505 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 CEBPBP17676 345 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 AARSP49588 968 aaKnown RBP eCLIP9.81□□□□□ -0.843e-49■■■■■ 252.4
SMC4-213ENST00000472282 GSK3AP49840 483 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 CDR1P51861 262 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 DLG4P78352 724 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 DHX9Q08211 1270 aaKnown RBP9.81□□□□□ -0.84
SMC4-213ENST00000472282 STX1AQ16623 288 aa9.81□□□□□ -0.84
SMC4-213ENST00000472282 SKOR2Q2VWA4 1001 aaPredicted RBP9.81□□□□□ -0.84
SMC4-213ENST00000472282 PRSS36Q5K4E3 855 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms