RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 OLFML3Q9NRN5 406 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 PCDHGB4Q9UN71 923 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 PCDHGB5Q9Y5G0 923 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 COL4A1P02462 1669 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 RGPD3A6NKT7 1758 aaPredicted RBP9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 RGPD4Q7Z3J3 1758 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 NUP98P52948 1817 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 RBM47A0AV96 593 aaKnown RBP9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 F5H6K3 240 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 K7ENM7 598 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 VIL1P09327 827 aaKnown RBP9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 KLRC2P26717 231 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 MLH1P40692 756 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 CLK2P49760 499 aaKnown RBP9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 NCKAP1LP55160 1127 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 GPX6P59796 221 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 DYNLT1P63172 113 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 PRKD1Q15139 912 aaPredicted RBP9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 TMCO4Q5TGY1 634 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 GRAMD4Q6IC98 578 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 RNF111Q6ZNA4 994 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 CTAGE3PQ8IX95 158 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 SEPT12Q8IYM1 358 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 OGFOD1Q8N543 542 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 ZNF276Q8N554 614 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 BANPQ8N9N5 519 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 SLC13A1Q9BZW2 595 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 DOLKQ9UPQ8 538 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 INPP5FQ9Y2H2 1132 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 TBC1D30Q9Y2I9 924 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 DTNAQ9Y4J8 743 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 MYH11P35749 1972 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 TAF1P21675 1872 aa9.98□□□□□ -0.81
NHLRC3-203ENST00000470258 ZBTB5O15062 677 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 PLSCR1O15162 318 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 TFAP2AP05549 437 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 AKR1B1P15121 316 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 RFX1P22670 979 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 SMARCA1P28370 1054 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 GTF2H1P32780 548 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 SPIRE1Q08AE8 756 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 CNGA3Q16281 694 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 MYLK3Q32MK0 819 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 MAP3K21Q5TCX8 1036 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 SYDE2Q5VT97 1194 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 METTL25Q8N6Q8 603 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 FAM84AQ96KN4 292 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 CBWD1Q9BRT8 395 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 MTMR4Q9NYA4 1195 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 RABGEF1Q9UJ41 708 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 DOT1LQ8TEK3 1739 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 TOGARAM1Q9Y4F4 1720 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 LOC100653049A0A140TA62 436 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 FAM86B1E9PN63 330 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 KRT34O76011 436 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 FAM86B2P0C5J1 330 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 HOXA13P31271 388 aaPredicted RBP9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 MFAP3P55082 362 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 RPS8P62241 208 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 PTK7Q13308 1070 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 PEX6Q13608 980 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 TLR1Q15399 786 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 CYTH1Q15438 398 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 EFHC2Q5JST6 749 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 ACAD10Q6JQN1 1059 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 UGT2A3Q6UWM9 527 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 NCCRP1Q6ZVX7 275 aaPredicted RBP9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 ZNF720Q7Z2F6 126 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 FAM71AQ8IYT1 594 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 ATP11CQ8NB49 1132 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 FBXO36Q8NEA4 188 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 PPP1R14CQ8TAE6 165 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 C11orf70Q9BRQ4 267 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 WWP1Q9H0M0 922 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 GPAMQ9HCL2 828 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 SOX13Q9UN79 622 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 PLA2G4CQ9UP65 541 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 SNED1Q8TER0 1413 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 TRIM43BA6NCK2 446 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 TTLL13PA6NNM8 815 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 H3BSA7 217 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 COPEO14579 308 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 EIF3DO15371 548 aaKnown RBP eCLIP9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 STRNO43815 780 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 PROCP04070 461 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 INHBAP08476 426 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 SMIM18P0DKX4 95 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 CRKLP46109 303 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 ZNF543Q08ER8 600 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 BST1Q10588 318 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 HNRNPDQ14103 355 aaKnown RBP9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 GK3PQ14409 553 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 KRT81Q14533 505 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 CHI3L2Q15782 390 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 ZCCHC23Q6ZST2 131 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 DENND5BQ6ZUT9 1274 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 TMC7Q7Z402 723 aa9.97□□□□□ -0.81
NHLRC3-203ENST00000470258 RELL1Q8IUW5 271 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms