RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 STK3Q13188 491 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 SLC14A1Q13336 389 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 ANKRD1Q15327 319 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 TRIP6Q15654 476 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 LYSMD4Q5XG99 296 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 TMEFF1Q8IYR6 380 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 THEM5Q8N1Q8 247 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 OXER1Q8TDS5 423 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 OSCP1Q8WVF1 389 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 USP13Q92995 863 aaPredicted RBP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 DRC1Q96MC2 740 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 TSPAN18Q96SJ8 248 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 LPIN3Q9BQK8 851 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 IL21Q9HBE4 155 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 BCCIPQ9P287 314 aaKnown RBP eCLIP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 DSEQ9UL01 958 aa9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 UBQLN1Q9UMX0 589 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 NOL7Q9UMY1 257 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 APOBEC2Q9Y235 224 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 HELZ2Q9BYK8 2649 aaKnown RBP9.63□□□□□ -0.87
SYNGAP1-205ENST00000470232 PI4KAP42356 2102 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 AP5Z1O43299 807 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MED24O75448 989 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 SOAT2O75908 522 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 SERPINF2P08697 491 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 HARSP12081 509 aaKnown RBP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 P2RY2P41231 377 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MATR3P43243 847 aaKnown RBP eCLIP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 AARSP49588 968 aaKnown RBP eCLIP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 PEX3P56589 373 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MRPS21P82921 87 aaKnown RBP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 STRN3Q13033 797 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 DMP1Q13316 513 aaPredicted RBP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MTF1Q14872 753 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 CRY1Q16526 586 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 KYAT1Q16773 422 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 SLC10A6Q3KNW5 377 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 HSF5Q4G112 596 aaPredicted RBP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 SLC39A12Q504Y0 691 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 C2orf27AQ580R0 203 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 HAUS3Q68CZ6 603 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 SLC36A4Q6YBV0 504 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 CCNI2Q6ZMN8 369 aaPredicted RBP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MON1AQ86VX9 555 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 METTL23Q86XA0 190 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 NECAB1Q8N987 351 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 FAM184AQ8NB25 1140 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 OLIG1Q8TAK6 271 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 SPPL2BQ8TCT7 592 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 USP33Q8TEY7 942 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 GIPC2Q8TF65 315 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 ADAMTS14Q8WXS8 1223 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MTMR9Q96QG7 549 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 TARS2Q9BW92 718 aaKnown RBP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 KMT5AQ9NQR1 393 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 UXTQ9UBK9 157 aaPredicted RBP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MBD1Q9UIS9 605 aaPredicted RBP9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 PILRBQ9UKJ0 227 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MMP17Q9ULZ9 603 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 MTMR6Q9Y217 621 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 CCL26Q9Y258 94 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 ZKSCAN5Q9Y2L8 839 aa9.62□□□□□ -0.87
SYNGAP1-205ENST00000470232 STK36Q9NRP7 1315 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 TK2O00142 265 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 CLDN3O15551 220 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 ZNF500O60304 480 aaPredicted RBP9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 TOM1L1O75674 476 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 NFATC1O95644 943 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 F11P03951 625 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 USP17L7P0C7H9 530 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 CSH1P0DML2 217 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 CSH2P0DML3 217 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 PROZP22891 400 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 NPTX2P47972 431 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 SEC13P55735 322 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 NLRP12P59046 1061 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 ST3GAL1Q11201 340 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 TOB2Q14106 344 aaPredicted RBP9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 NOLC1Q14978 699 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 ME3Q16798 604 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 EARS2Q5JPH6 523 aaKnown RBP9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 TXNDC8Q6A555 127 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 ARMCX6Q7L4S7 300 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 DCP1BQ8IZD4 617 aaKnown RBP9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 PGBD3Q8N328 593 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 MINDY1Q8N5J2 469 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 MDGA1Q8NFP4 955 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 ADAM32Q8TC27 787 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 BBC3Q96PG8 261 aaPredicted RBP9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 C17orf75Q9HAS0 396 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 POLD4Q9HCU8 107 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 TMEM74BQ9NUR3 256 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 TUBGCP4Q9UGJ1 667 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 STK24Q9Y6E0 443 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 CACNA1EQ15878 2313 aa9.61□□□□□ -0.87
SYNGAP1-205ENST00000470232 MYMKA6NI61 221 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms