RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 NUP62CLQ9H1M0 184 aa12.05□□□□□ -0.48
SSR3-202ENST00000463503 HPS4Q9NQG7 708 aa12.05□□□□□ -0.48
SSR3-202ENST00000463503 PANK4Q9NVE7 773 aa12.05□□□□□ -0.48
SSR3-202ENST00000463503 SLC8A2Q9UPR5 921 aa12.05□□□□□ -0.48
SSR3-202ENST00000463503 GPSM3Q9Y4H4 160 aa12.05□□□□□ -0.48
SSR3-202ENST00000463503 SHROOM3Q8TF72 1996 aa12.05□□□□□ -0.48
SSR3-202ENST00000463503 NPHP3-ACAD11A0A0J9YXS1 232 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 ATG13O75143 517 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 FAM13AO94988 1023 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 SMC2O95347 1197 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 EGFP01133 1207 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 RPN1P04843 607 aaKnown RBP12.04□□□□□ -0.48
SSR3-202ENST00000463503 KRT18P05783 430 aaKnown RBP12.04□□□□□ -0.48
SSR3-202ENST00000463503 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 CPB1P15086 417 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 WEE1P30291 646 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 SMTNP53814 917 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 ASIC1P78348 528 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 DMP1Q13316 513 aaPredicted RBP12.04□□□□□ -0.48
SSR3-202ENST00000463503 ALCAMQ13740 583 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 ITPRIPL2Q3MIP1 535 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 COBLL1Q53SF7 1204 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 CCDC183Q5T5S1 534 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 DYMQ7RTS9 669 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 GRAMD1CQ8IYS0 662 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 TTC9BQ8N6N2 239 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 TRIML1Q8N9V2 468 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 BPIFB1Q8TDL5 484 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 EZH1Q92800 747 aaPredicted RBP12.04□□□□□ -0.48
SSR3-202ENST00000463503 CCDC47Q96A33 483 aaKnown RBP12.04□□□□□ -0.48
SSR3-202ENST00000463503 SYAP1Q96A49 352 aaPredicted RBP12.04□□□□□ -0.48
SSR3-202ENST00000463503 C18orf25Q96B23 403 aaPredicted RBP12.04□□□□□ -0.48
SSR3-202ENST00000463503 HVCN1Q96D96 273 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 STRA6Q9BX79 667 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 TMEM134Q9H6X4 195 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 RMND1Q9NWS8 449 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 ARHGAP28Q9P2N2 729 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 PCDHA5Q9Y5H7 936 aa12.04□□□□□ -0.48
SSR3-202ENST00000463503 MYO18AQ92614 2054 aaKnown RBP12.04□□□□□ -0.48
SSR3-202ENST00000463503 MYOFQ9NZM1 2061 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 TRDMT1O14717 391 aaKnown RBP12.03□□□□□ -0.48
SSR3-202ENST00000463503 TRAK2O60296 914 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 PPP1R37O75864 691 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 RHOBTB1O94844 696 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 ZIC2O95409 532 aaPredicted RBP12.03□□□□□ -0.48
SSR3-202ENST00000463503 OR4Q2P0C623 313 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 KCNE1P15382 129 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 GRM5P41594 1212 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 NPTX2P47972 431 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 EFNA5P52803 228 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 PNOCQ13519 176 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 ATF7IP2Q5U623 682 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 NAIF1Q69YI7 327 aaPredicted RBP12.03□□□□□ -0.48
SSR3-202ENST00000463503 HAUS6Q7Z4H7 955 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 TMEM130Q8N3G9 435 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 RIN3Q8TB24 985 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 SMARCE1Q969G3 411 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 PSMG2Q969U7 264 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 PGLYRP2Q96PD5 576 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
SSR3-202ENST00000463503 FAM83CQ9BQN1 747 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 SMG9Q9H0W8 520 aaKnown RBP12.03□□□□□ -0.48
SSR3-202ENST00000463503 CDT1Q9H211 546 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 BLZF1Q9H2G9 400 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 FBRSL1Q9HCM7 1045 aaKnown RBP12.03□□□□□ -0.48
SSR3-202ENST00000463503 SLC38A7Q9NVC3 462 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 CNTN3Q9P232 1028 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 EBF1Q9UH73 591 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 UBE4BO95155 1302 aa12.03□□□□□ -0.48
SSR3-202ENST00000463503 ATMQ13315 3056 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 FAM221BA6H8Z2 402 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 KHNYNO15037 678 aaKnown RBP12.02□□□□□ -0.49
SSR3-202ENST00000463503 EIF3DO15371 548 aaKnown RBP eCLIP12.02□□□□□ -0.49
SSR3-202ENST00000463503 LETM1O95202 739 aaPredicted RBP12.02□□□□□ -0.49
SSR3-202ENST00000463503 IDEP14735 1019 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 PEX3P56589 373 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 GTF2BQ00403 316 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 GRSF1Q12849 480 aaKnown RBP eCLIP12.02□□□□□ -0.49
SSR3-202ENST00000463503 DUSP4Q13115 394 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 PLD1Q13393 1074 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 KMT5BQ4FZB7 885 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 GPR158Q5T848 1215 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 TRIM68Q6AZZ1 485 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 SYT13Q7L8C5 426 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 ZNF720Q7Z2F6 126 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 PDZD3Q86UT5 571 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 SFR1Q86XK3 245 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 MYCT1Q8N699 235 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 TMEM161BQ8NDZ6 487 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 IL21Q9HBE4 155 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 PTPRHQ9HD43 1115 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 TOPORSQ9NS56 1045 aaPredicted RBP12.02□□□□□ -0.49
SSR3-202ENST00000463503 EXOC1Q9NV70 894 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 TMEM63CQ9P1W3 806 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.49
SSR3-202ENST00000463503 NUB1Q9Y5A7 615 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms