RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SPATA2LQ8IUW3 424 aaPredicted RBP18.86■□□□□ 0.61
VPS52-214ENST00000463486 SHKBP1Q8TBC3 707 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 GIPC2Q8TF65 315 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 ARID3AQ99856 593 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 KCNK12Q9HB15 430 aa18.86■□□□□ 0.61
VPS52-214ENST00000463486 MRPS23Q9Y3D9 190 aaKnown RBP18.86■□□□□ 0.61
VPS52-214ENST00000463486 ZFP37Q9Y6Q3 630 aaPredicted RBP18.86■□□□□ 0.61
VPS52-214ENST00000463486 P4HA2O15460 535 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 DCXO43602 365 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 CILPO75339 1184 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 FGFR1OPO95684 399 aaKnown RBP18.85■□□□□ 0.61
VPS52-214ENST00000463486 ORC1Q13415 861 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 PTPN21Q16825 1174 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 CYP4A22Q5TCH4 519 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 VSTM1Q6UX27 236 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 C4orf50Q6ZRC1 276 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 TMEM150AQ86TG1 271 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 ACOT1Q86TX2 421 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 ELMOD1Q8N336 334 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 UBR7Q8N806 425 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 LEMD2Q8NC56 503 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 STKLD1Q8NE28 680 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 ING5Q8WYH8 240 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 CNOT6LQ96LI5 555 aaKnown RBP18.85■□□□□ 0.61
VPS52-214ENST00000463486 ZSWIM3Q96MP5 696 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 IMPG2Q9BZV3 1241 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 ELOVL4Q9GZR5 314 aa18.85■□□□□ 0.61
VPS52-214ENST00000463486 MAGEC2Q9UBF1 373 aaPredicted RBP18.85■□□□□ 0.61
VPS52-214ENST00000463486 ZNF197O14709 1029 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 CCDC192P0DO97 292 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 GJA1P17302 382 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 BDNFP23560 247 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 MTMR3Q13615 1198 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 HTR4Q13639 388 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 PDZD4Q76G19 769 aaPredicted RBP18.84■□□□□ 0.61
VPS52-214ENST00000463486 FUKQ8N0W3 1084 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 RSAD2Q8WXG1 361 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 RPP25Q9BUL9 199 aaKnown RBP18.84■□□□□ 0.61
VPS52-214ENST00000463486 ZNF518BQ9C0D4 1074 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 SMOC2Q9H3U7 446 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 THAP9Q9H5L6 903 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 C11orf16Q9NQ32 467 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 ASAH2Q9NR71 780 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 GDE1Q9NZC3 331 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 DACH1Q9UI36 760 aa18.84■□□□□ 0.61
VPS52-214ENST00000463486 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.84■□□□□ 0.61
VPS52-214ENST00000463486 TECTAO75443 2155 aa18.83■□□□□ 0.61
VPS52-214ENST00000463486 CLDN5O00501 218 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 NOL4O94818 638 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 AFPP02771 609 aaKnown RBP18.83■□□□□ 0.6
VPS52-214ENST00000463486 MYL4P12829 197 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 RPL10AP62906 217 aaKnown RBP18.83■□□□□ 0.6
VPS52-214ENST00000463486 CYP27A1Q02318 531 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 WDR44Q5JSH3 913 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 PARM1Q6UWI2 310 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 C11orf57Q6ZUT1 292 aaPredicted RBP18.83■□□□□ 0.6
VPS52-214ENST00000463486 ITIH5Q86UX2 942 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 C12orf29Q8N999 325 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 CCDC150Q8NCX0 1101 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 EHBP1Q8NDI1 1231 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 ST13P5Q8NFI4 369 aaPredicted RBP18.83■□□□□ 0.6
VPS52-214ENST00000463486 ENOX1Q8TC92 643 aaKnown RBP18.83■□□□□ 0.6
VPS52-214ENST00000463486 FGF14Q92915 247 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 MCRS1Q96EZ8 462 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 TNIP3Q96KP6 325 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 SPATA17Q96L03 361 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 MYRFLQ96LU7 910 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 FAM124BQ9H5Z6 455 aaPredicted RBP18.83■□□□□ 0.6
VPS52-214ENST00000463486 CISHQ9NSE2 258 aa18.83■□□□□ 0.6
VPS52-214ENST00000463486 SAMSN1Q9NSI8 373 aaKnown RBP18.83■□□□□ 0.6
VPS52-214ENST00000463486 SLC38A8A6NNN8 435 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 F11P03951 625 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 ALADP13716 330 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 CD58P19256 250 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 ACO1P21399 889 aaKnown RBP18.82■□□□□ 0.6
VPS52-214ENST00000463486 FCARP24071 287 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 ZXDAP98168 799 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 CUL2Q13617 745 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 TEAD2Q15562 447 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 STXBP5Q5T5C0 1151 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 EDAQ92838 391 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 TRMT2BQ96GJ1 504 aaKnown RBP18.82■□□□□ 0.6
VPS52-214ENST00000463486 C8orf48Q96LL4 319 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 CEP295NLQ96MC4 621 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 IGSF9Q9P2J2 1179 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 SORCS3Q9UPU3 1222 aa18.82■□□□□ 0.6
VPS52-214ENST00000463486 A0A1W2PRU2 124 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 F8VP50 259 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 GABRR2P28476 465 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 RAD23BP54727 409 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 USP46P62068 366 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 LRMPQ12912 555 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 VEPH1Q14D04 833 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 FAM78AQ5JUQ0 283 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 MIIPQ5JXC2 388 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 FAM35AQ86V20 835 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 SCN4BQ8IWT1 228 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 SLC44A3Q8N4M1 653 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 SLC4A11Q8NBS3 891 aa18.81■□□□□ 0.6
VPS52-214ENST00000463486 FAM200AQ8TCP9 573 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms