RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 H3BQ06 376 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 RNF225M0QZC1 329 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 EPHB6O15197 1021 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 SOAT2O75908 522 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 HAPLN1P10915 354 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 HOXB8P17481 243 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 RFX1P22670 979 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 CYP2F1P24903 491 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 HOXA9P31269 272 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 POLR2FP61218 127 aaKnown RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 CLUL1Q15846 466 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 RARS2Q5T160 578 aaKnown RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 TMC5Q6UXY8 1006 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 PAQR9Q6ZVX9 377 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 RTL10Q7L3V2 364 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 RBBP8NLQ8NC74 664 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 CMASQ8NFW8 434 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 NEK11Q8NG66 645 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 FEZF2Q8TBJ5 459 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 SHC3Q92529 594 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 HEXIM2Q96MH2 286 aaKnown RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 SEPT5Q99719 369 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 APOL5Q9BWW9 433 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 RHOBTB2Q9BYZ6 727 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 ABCB6Q9NP58 842 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 FAM49BQ9NUQ9 324 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 ZDHHC7Q9NXF8 308 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 CNTN6Q9UQ52 1028 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 MTCL1Q9Y4B5 1905 aaKnown RBP12.54□□□□□ -0.4
CPNE1-221ENST00000462352 EYSQ5T1H1 3165 aa12.54□□□□□ -0.4
CPNE1-221ENST00000462352 CLDN5O00501 218 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 CCL16O15467 120 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 PAPLNO95428 1278 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 LRG1P02750 347 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 PAEPP09466 180 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 HNRNPA1P09651 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPNE1-221ENST00000462352 KRT5P13647 590 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 CCDC130P13994 396 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 BDNFP23560 247 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 MAGEA11P43364 429 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 TUFMP49411 452 aaKnown RBP12.53□□□□□ -0.4
CPNE1-221ENST00000462352 ZNF132P52740 706 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 TWF1Q12792 350 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 DRAP1Q14919 205 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-221ENST00000462352 FAM35AQ86V20 835 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 FUKQ8N0W3 1084 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 SLC2A14Q8TDB8 520 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 ZNF707Q96C28 371 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-221ENST00000462352 CYFIP2Q96F07 1278 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 HNRNPABQ99729 332 aaKnown RBP12.53□□□□□ -0.4
CPNE1-221ENST00000462352 MED10Q9BTT4 135 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 STK33Q9BYT3 514 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 PRKD2Q9BZL6 878 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 ZNF518BQ9C0D4 1074 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 XPO4Q9C0E2 1151 aaKnown RBP12.53□□□□□ -0.4
CPNE1-221ENST00000462352 GPR88Q9GZN0 384 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 S1PR5Q9H228 398 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 CD207Q9UJ71 328 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 DAAM1Q9Y4D1 1078 aa12.53□□□□□ -0.4
CPNE1-221ENST00000462352 FOXN3O00409 490 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-221ENST00000462352 CBFA2T2O43439 604 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 XYLBO75191 536 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 POU2F2P09086 479 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 PNMA6AP0CW24 399 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-221ENST00000462352 VDRP11473 427 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 CD19P15391 556 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 ATF6P18850 670 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 ADORA2BP29275 332 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 PBX1P40424 430 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 USP8P40818 1118 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 ALDH1A3P47895 512 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 GPR15P49685 360 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 PLCB2Q00722 1185 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 TFF2Q03403 129 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 ITIH3Q06033 890 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 PLD1Q13393 1074 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 DDR2Q16832 855 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 PPP1R26Q5T8A7 1209 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-221ENST00000462352 ARHGAP17Q68EM7 881 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 SMYD5Q6GMV2 418 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 VSTM1Q6UX27 236 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 GPR149Q86SP6 731 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 SCN4BQ8IWT1 228 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 ADAM7Q9H2U9 754 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 NLRC4Q9NPP4 1024 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 TMEM30AQ9NV96 361 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 CEP72Q9P209 647 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 CDH22Q9UJ99 828 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 KIAA1257Q9ULG3 409 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 ATP8B3O60423 1300 aa12.52□□□□□ -0.41
CPNE1-221ENST00000462352 F8VZ95 297 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 AP5Z1O43299 807 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 CALCAP01258 141 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 TPM3P06753 285 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 GRIK1P39086 918 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 CACNA2D1P54289 1103 aa12.51□□□□□ -0.41
CPNE1-221ENST00000462352 EPHB3P54753 998 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms