RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KRT71Q3SY84 523 aa21.32■■□□□ 1
CCM2-203ENST00000461377 KAZNQ674X7 775 aa21.32■■□□□ 1
CCM2-203ENST00000461377 DRICH1Q6PGQ1 229 aaPredicted RBP21.32■■□□□ 1
CCM2-203ENST00000461377 TMEM40Q8WWA1 233 aa21.32■■□□□ 1
CCM2-203ENST00000461377 SEMA4AQ9H3S1 761 aa21.32■■□□□ 1
CCM2-203ENST00000461377 DOCK3Q8IZD9 2030 aa21.31■■□□□ 1
CCM2-203ENST00000461377 SHBGP04278 402 aa21.31■■□□□ 1
CCM2-203ENST00000461377 ATF7P17544 494 aaPredicted RBP21.31■■□□□ 1
CCM2-203ENST00000461377 ATP1A2P50993 1020 aa21.31■■□□□ 1
CCM2-203ENST00000461377 HNRNPH2P55795 449 aaKnown RBP21.31■■□□□ 1
CCM2-203ENST00000461377 GNGT1P63211 74 aa21.31■■□□□ 1
CCM2-203ENST00000461377 ZNF200P98182 395 aaPredicted RBP21.31■■□□□ 1
CCM2-203ENST00000461377 CAV1Q03135 178 aa21.31■■□□□ 1
CCM2-203ENST00000461377 TRIP13Q15645 432 aaPredicted RBP21.31■■□□□ 1
CCM2-203ENST00000461377 TFDP3Q5H9I0 405 aa21.31■■□□□ 1
CCM2-203ENST00000461377 CHADLQ6NUI6 762 aa21.31■■□□□ 1
CCM2-203ENST00000461377 RGMBQ6NW40 437 aa21.31■■□□□ 1
CCM2-203ENST00000461377 EMC1Q8N766 993 aa21.31■■□□□ 1
CCM2-203ENST00000461377 UBA3Q8TBC4 463 aa21.31■■□□□ 1
CCM2-203ENST00000461377 C18orf25Q96B23 403 aaPredicted RBP21.31■■□□□ 1
CCM2-203ENST00000461377 MRPL45Q9BRJ2 306 aaKnown RBP21.31■■□□□ 1
CCM2-203ENST00000461377 KATNAL1Q9BW62 490 aa21.31■■□□□ 1
CCM2-203ENST00000461377 LRRC4CQ9HCJ2 640 aa21.31■■□□□ 1
CCM2-203ENST00000461377 AAASQ9NRG9 546 aa21.31■■□□□ 1
CCM2-203ENST00000461377 TSPAN16Q9UKR8 245 aa21.31■■□□□ 1
CCM2-203ENST00000461377 TRPM7Q96QT4 1865 aa21.31■■□□□ 1
CCM2-203ENST00000461377 LRRD1A4D1F6 860 aa21.3■■□□□ 1
CCM2-203ENST00000461377 C3orf70A6NLC5 250 aaPredicted RBP21.3■■□□□ 1
CCM2-203ENST00000461377 HOXC8P31273 242 aa21.3■■□□□ 1
CCM2-203ENST00000461377 ODF2Q5BJF6 829 aa21.3■■□□□ 1
CCM2-203ENST00000461377 HOOK3Q86VS8 718 aa21.3■■□□□ 1
CCM2-203ENST00000461377 IPO4Q8TEX9 1081 aaKnown RBP21.3■■□□□ 1
CCM2-203ENST00000461377 ACSF2Q96CM8 615 aaPredicted RBP21.3■■□□□ 1
CCM2-203ENST00000461377 TRIM6Q9C030 488 aaPredicted RBP21.3■■□□□ 1
CCM2-203ENST00000461377 SNX9Q9Y5X1 595 aa21.3■■□□□ 1
CCM2-203ENST00000461377 C17orf102A2RUQ5 167 aa21.3■■□□□ 1
CCM2-203ENST00000461377 RIPK2O43353 540 aa21.3■■□□□ 1
CCM2-203ENST00000461377 PFKMP08237 780 aa21.3■■□□□ 1
CCM2-203ENST00000461377 KRT7P08729 469 aa21.3■■□□□ 1
CCM2-203ENST00000461377 KLRC2P26717 231 aa21.3■■□□□ 1
CCM2-203ENST00000461377 IL1R2P27930 398 aa21.3■■□□□ 1
CCM2-203ENST00000461377 ITGA8P53708 1063 aa21.3■■□□□ 1
CCM2-203ENST00000461377 LMNB2Q03252 620 aa21.3■■□□□ 1
CCM2-203ENST00000461377 SLC29A2Q14542 456 aa21.3■■□□□ 1
CCM2-203ENST00000461377 HADHQ16836 314 aaKnown RBP21.3■■□□□ 1
CCM2-203ENST00000461377 ZNF365Q70YC5 407 aa21.3■■□□□ 1
CCM2-203ENST00000461377 DPH6Q7L8W6 267 aa21.3■■□□□ 1
CCM2-203ENST00000461377 CCDC89Q8N998 374 aa21.3■■□□□ 1
CCM2-203ENST00000461377 UBQLN1Q9UMX0 589 aaKnown RBP21.3■■□□□ 1
CCM2-203ENST00000461377 PIN4Q9Y237 131 aaKnown RBP21.3■■□□□ 1
CCM2-203ENST00000461377 EIF3HO15372 352 aaKnown RBP eCLIP21.29■■□□□ 1
CCM2-203ENST00000461377 IVLP07476 585 aa21.29■■□□□ 1
CCM2-203ENST00000461377 SLC10A3P09131 477 aa21.29■■□□□ 1
CCM2-203ENST00000461377 ADCY8P40145 1251 aa21.29■■□□□ 1
CCM2-203ENST00000461377 ACAP1Q15027 740 aa21.29■■□□□ 1
CCM2-203ENST00000461377 GOLGA7BQ2TAP0 167 aa21.29■■□□□ 1
CCM2-203ENST00000461377 GLRA4Q5JXX5 417 aa21.29■■□□□ 1
CCM2-203ENST00000461377 UBXN11Q5T124 520 aa21.29■■□□□ 1
CCM2-203ENST00000461377 UBAP2Q5T6F2 1119 aaKnown RBP21.29■■□□□ 1
CCM2-203ENST00000461377 C9orf57Q5W0N0 161 aa21.29■■□□□ 1
CCM2-203ENST00000461377 SAPCD2Q86UD0 394 aa21.29■■□□□ 1
CCM2-203ENST00000461377 ARFGAP2Q8N6H7 521 aa21.29■■□□□ 1
CCM2-203ENST00000461377 TRAIPQ9BWF2 469 aa21.29■■□□□ 1
CCM2-203ENST00000461377 EFR3BQ9Y2G0 817 aa21.29■■□□□ 1
CCM2-203ENST00000461377 AKAP5P24588 427 aa21.28■■□□□ 1
CCM2-203ENST00000461377 CRYBB1P53674 252 aaPredicted RBP21.28■■□□□ 1
CCM2-203ENST00000461377 PURAQ00577 322 aaKnown RBP21.28■■□□□ 1
CCM2-203ENST00000461377 FSCN1Q16658 493 aaKnown RBP21.28■■□□□ 1
CCM2-203ENST00000461377 FAM102AQ5T9C2 384 aaPredicted RBP21.28■■□□□ 1
CCM2-203ENST00000461377 TRMT10CQ7L0Y3 403 aaKnown RBP21.28■■□□□ 1
CCM2-203ENST00000461377 C12orf29Q8N999 325 aa21.28■■□□□ 1
CCM2-203ENST00000461377 BBOF1Q8ND07 529 aa21.28■■□□□ 1
CCM2-203ENST00000461377 TMEM109Q9BVC6 243 aa21.28■■□□□ 1
CCM2-203ENST00000461377 MIS12Q9H081 205 aa21.28■■□□□ 1
CCM2-203ENST00000461377 TSPYL1Q9H0U9 437 aa21.28■■□□□ 1
CCM2-203ENST00000461377 ZWILCHQ9H900 591 aa21.28■■□□□ 1
CCM2-203ENST00000461377 ZFYVE28Q9HCC9 887 aa21.28■■□□□ 1
CCM2-203ENST00000461377 BCCIPQ9P287 314 aaKnown RBP eCLIP21.28■■□□□ 1
CCM2-203ENST00000461377 DNPEPQ9ULA0 475 aa21.28■■□□□ 1
CCM2-203ENST00000461377 NME7Q9Y5B8 376 aa21.28■■□□□ 1
CCM2-203ENST00000461377 TNPO2O14787 897 aaKnown RBP21.28■■□□□ 1
CCM2-203ENST00000461377 CHKAP35790 457 aa21.28■■□□□ 1
CCM2-203ENST00000461377 INHBEP58166 350 aa21.28■■□□□ 1
CCM2-203ENST00000461377 BYSLQ13895 437 aaKnown RBP21.28■■□□□ 1
CCM2-203ENST00000461377 TAZQ16635 292 aa21.28■■□□□ 1
CCM2-203ENST00000461377 PKDCCQ504Y2 493 aa21.28■■□□□ 1
CCM2-203ENST00000461377 XKR4Q5GH76 650 aa21.28■■□□□ 1
CCM2-203ENST00000461377 NME8Q8N427 588 aa21.28■■□□□ 1
CCM2-203ENST00000461377 TLCD1Q96CP7 247 aa21.28■■□□□ 1
CCM2-203ENST00000461377 APOL6Q9BWW8 343 aa21.28■■□□□ 1
CCM2-203ENST00000461377 CALCOCO1Q9P1Z2 691 aa21.28■■□□□ 1
CCM2-203ENST00000461377 ANAPC5Q9UJX4 755 aa21.28■■□□□ 1
CCM2-203ENST00000461377 NOVA2Q9UNW9 492 aaKnown RBP21.28■■□□□ 1
CCM2-203ENST00000461377 DRG1Q9Y295 367 aaKnown RBP21.28■■□□□ 1
CCM2-203ENST00000461377 PPP1R26Q5T8A7 1209 aaPredicted RBP21.27■■□□□ 1
CCM2-203ENST00000461377 TTC19Q6DKK2 380 aaPredicted RBP21.27■■□□□ 1
CCM2-203ENST00000461377 UNC93AQ86WB7 457 aa21.27■■□□□ 1
CCM2-203ENST00000461377 CCDC25Q86WR0 208 aa21.27■■□□□ 1
CCM2-203ENST00000461377 TSPAN18Q96SJ8 248 aa21.27■■□□□ 1
CCM2-203ENST00000461377 E5RJQ4 531 aa21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms