RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 NOTUMQ6P988 496 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 SPATA4Q8NEY3 305 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 RNPC3Q96LT9 517 aaKnown RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 BBS2Q9BXC9 721 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 TUBA8Q9NY65 449 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 ADGRG1Q9Y653 693 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 PRMT3O60678 531 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 SEC24DO94855 1032 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 PPP2R1BP30154 601 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 TTKP33981 857 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 TRIM16LQ309B1 348 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 TIGD7Q6NT04 549 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 L3MBTL3Q96JM7 780 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 HSPBP1Q9NZL4 362 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 TRMT6Q9UJA5 497 aaKnown RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 SMIM31A0A1B0GVY4 71 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 ITGA4P13612 1032 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 YWHAZP63104 245 aaKnown RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 AGAP9Q5VTM2 703 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 SEPT5Q99719 369 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 TINF2Q9BSI4 451 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 NEK6Q9HC98 313 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 SLIT1O75093 1534 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 ENO1P06733 434 aaKnown RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 HOXC6P09630 235 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 ZNF24P17028 368 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 PSMC3P17980 439 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 SLC11A2P49281 568 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 GEMIN4P57678 1058 aaKnown RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 TCEAL5Q5H9L2 206 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 HS6ST3Q8IZP7 471 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 OMA1Q96E52 524 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 MKNK1Q9BUB5 465 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 C20orf96Q9NUD7 363 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 VPS51Q9UID3 782 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 FBXL5Q9UKA1 691 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 INO80Q9ULG1 1556 aaPredicted RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 WWP2O00308 870 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 ATP9BO43861 1147 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 CYP2C8P10632 490 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 PCSK2P16519 638 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 TMC5Q6UXY8 1006 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 ZNF507Q8TCN5 953 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 SPIRE2Q8WWL2 714 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 REPS1Q96D71 796 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 PUS7LQ9H0K6 701 aaKnown RBP9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 GOLPH3Q9H4A6 298 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 APEX2Q9UBZ4 518 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 GRID1Q9ULK0 1009 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 RAD54BQ9Y620 910 aa9.23□□□□□ -0.93
SHROOM4-203ENST00000460112 MYO3AQ8NEV4 1616 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 SLC16A1P53985 500 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 NDUFA5Q16718 116 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 XKR3Q5GH77 459 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 ZNF589Q86UQ0 364 aaPredicted RBP9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 PABPC5Q96DU9 382 aaKnown RBP9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 HINFPQ9BQA5 517 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 NT5C1AQ9BXI3 368 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 C8orf4Q9NR00 106 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 A0A1B0GTH6 734 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 CES2O00748 559 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 CAND2O75155 1236 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 USP1O94782 785 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 SLC25A27O95847 323 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 SLC18A3Q16572 532 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 CCDC103Q8IW40 242 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 IL17REQ8NFR9 667 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 APOL5Q9BWW9 433 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 PACSIN1Q9BY11 444 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 CYP39A1Q9NYL5 469 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 STON1Q9Y6Q2 735 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 IGSF9BQ9UPX0 1349 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 TMEM94Q12767 1356 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 CNTFP26441 200 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 MDH1P40925 334 aaKnown RBP9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 STAT5BP51692 787 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 CORO7P57737 925 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 LLGL1Q15334 1064 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 EPHA7Q15375 998 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 HERC6Q8IVU3 1022 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 USP33Q8TEY7 942 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 DCLRE1BQ9H816 532 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 LNPEPQ9UIQ6 1025 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 DYRK1BQ9Y463 629 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 ZMYM2Q9UBW7 1377 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 MMP10P09238 476 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 CD302Q8IX05 232 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 CNDP1Q96KN2 507 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 TMEM237Q96Q45 408 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 WDR41Q9HAD4 459 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 SCUBE2Q9NQ36 999 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 STK39Q9UEW8 545 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 SPEF2Q9C093 1822 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 SMIM22K7EJ46 135 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 TBX3O15119 743 aa9.22□□□□□ -0.93
SHROOM4-203ENST00000460112 ZBTB22O15209 634 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms