RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SGK1O00141 431 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 FLT3LGP49771 235 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 ZNF252P-AS1Q0IIN9 211 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 SIX1Q15475 284 aaPredicted RBP14.39□□□□□ -0.11
CLK3-203ENST00000454830 UBE2Q2Q8WVN8 375 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 SNX27Q96L92 541 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 SEMA4AQ9H3S1 761 aa14.39□□□□□ -0.11
CLK3-203ENST00000454830 NR1D1P20393 614 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 MAN1A1P33908 653 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 ADCY2Q08462 1091 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 CNGA2Q16280 664 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 PPP1R26Q5T8A7 1209 aaPredicted RBP14.38□□□□□ -0.11
CLK3-203ENST00000454830 SPOCD1Q6ZMY3 1216 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 ATP6V1G3Q96LB4 118 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 CACNG4Q9UBN1 327 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 XPOTO43592 962 aaKnown RBP14.38□□□□□ -0.11
CLK3-203ENST00000454830 SLC29A2Q14542 456 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 ZSCAN26Q16670 478 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 FBXO47Q5MNV8 452 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 XYLT1Q86Y38 959 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 ZFP42Q96MM3 310 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 MAK16Q9BXY0 300 aaKnown RBP14.38□□□□□ -0.11
CLK3-203ENST00000454830 C10orf88Q9H8K7 445 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 WDR35Q9P2L0 1181 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 DNAH12Q6ZR08 3092 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 SMIM28A0A1B0GU29 152 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 SIGLEC16A6NMB1 481 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 RPS6KA5O75582 802 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 HOXD8P13378 290 aaPredicted RBP14.38□□□□□ -0.11
CLK3-203ENST00000454830 ITGA8P53708 1063 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 FCGRTP55899 365 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 CAPN12Q6ZSI9 719 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 ANKS1BQ7Z6G8 1248 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 SCUBE3Q8IX30 993 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 EIF1ADQ8N9N8 165 aaKnown RBP14.38□□□□□ -0.11
CLK3-203ENST00000454830 PWWP2AQ96N64 755 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 SLITRK1Q96PX8 696 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 LHX5Q9H2C1 402 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 HOMER3Q9NSC5 361 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 GRHL1Q9NZI5 618 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 DNPEPQ9ULA0 475 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 GABRQQ9UN88 632 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 CITO14578 2027 aa14.38□□□□□ -0.11
CLK3-203ENST00000454830 TULP2O00295 520 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 HUS1O60921 280 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 HMGCRP04035 888 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 LCP1P13796 627 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 GBP1P32455 592 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 ZNF844Q08AG5 666 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 NBPF20Q3BBV1 942 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 HP1BP3Q5SSJ5 553 aaPredicted RBP14.37□□□□□ -0.11
CLK3-203ENST00000454830 CYP4F22Q6NT55 531 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 RSPH3Q86UC2 560 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 NT5DC4Q86YG4 428 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.37□□□□□ -0.11
CLK3-203ENST00000454830 SNF8Q96H20 258 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 PLEKHA5Q9HAU0 1116 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 CCDC130P13994 396 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 DESP17661 470 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 GNL1P36915 607 aaPredicted RBP14.37□□□□□ -0.11
CLK3-203ENST00000454830 INHBEP58166 350 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 BYSLQ13895 437 aaKnown RBP14.37□□□□□ -0.11
CLK3-203ENST00000454830 C15orf59Q2T9L4 293 aaPredicted RBP14.37□□□□□ -0.11
CLK3-203ENST00000454830 B4GALNT4Q76KP1 1039 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 SH3GL2Q99962 352 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 DPEP3Q9H4B8 488 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 ZDHHC18Q9NUE0 388 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 SYNJ2BP-COX16A0A087WUM0 186 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 CST8O60676 142 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 KRT7P08729 469 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 ACTN2P35609 894 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 GPD2P43304 727 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 PURAQ00577 322 aaKnown RBP14.37□□□□□ -0.11
CLK3-203ENST00000454830 CYP1B1Q16678 543 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 C9orf57Q5W0N0 161 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 RXFP2Q8WXD0 754 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 FAM149B1Q96BN6 582 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 SELENOSQ9BQE4 189 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 ASNSD1Q9NWL6 643 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 COX16Q9P0S2 106 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 IPPQ9Y573 584 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 CDY2AQ9Y6F7 541 aa14.37□□□□□ -0.11
CLK3-203ENST00000454830 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 PRPSAP2O60256 369 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 LRCH4O75427 683 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 SLC10A3P09131 477 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 ZSCAN5DPP0CG00 497 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 TRIM32Q13049 653 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 KRT81Q14533 505 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 TFDP3Q5H9I0 405 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 IZUMO3Q5VZ72 239 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 FAM183BPQ6ZVS7 135 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 CCDC89Q8N998 374 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 APPL2Q8NEU8 664 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 DDX56Q9NY93 547 aaKnown RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 RSPH14Q9UHP6 348 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 GJD2Q9UKL4 321 aa14.36□□□□□ -0.11
CLK3-203ENST00000454830 MBLAC1A4D2B0 266 aaPredicted RBP14.36□□□□□ -0.11
CLK3-203ENST00000454830 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms