RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 CCDC142Q17RM4 750 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 FAM182AQ5T1J6 154 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 TBC1D31Q96DN5 1066 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 FAM167AQ96KS9 214 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 GPR20Q99678 358 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 SYNCQ9H7C4 482 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 METTL5Q9NRN9 209 aaKnown RBP23.31■■□□□ 1.32
TTC3-210ENST00000450533 KLHL14Q9P2G3 628 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 GRID1Q9ULK0 1009 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 TRIM33Q9UPN9 1127 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 SHOC2Q9UQ13 582 aa23.31■■□□□ 1.32
TTC3-210ENST00000450533 EFTUD2Q15029 972 aaKnown RBP eCLIP23.3■■□□□ 1.329e-8■■■■□ 21.4
TTC3-210ENST00000450533 TAF5Q15542 800 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 HIF1AQ16665 826 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 MINDY3Q9H8M7 445 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 SLCO1B3Q9NPD5 702 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 HMGXB4Q9UGU5 601 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 STRIP2Q9ULQ0 834 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 SIGLEC16A6NMB1 481 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 IGF2BP3O00425 579 aaKnown RBP eCLIP23.3■■□□□ 1.32
TTC3-210ENST00000450533 TGFB3P10600 412 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 SSTR1P30872 391 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 CLCN3P51790 818 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 GPX6P59796 221 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 YWHAEP62258 255 aaKnown RBP23.3■■□□□ 1.32
TTC3-210ENST00000450533 SURF1Q15526 300 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 MSS51Q4VC12 460 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 ECHDC2Q86YB7 292 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 PLCD3Q8N3E9 789 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 WDR90Q96KV7 1748 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 TWNKQ96RR1 684 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 SMC6Q96SB8 1091 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 MAF1Q9H063 256 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 SDCBP2Q9H190 292 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 RXFP1Q9HBX9 757 aa23.3■■□□□ 1.32
TTC3-210ENST00000450533 CFAP73A6NFT4 308 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 NQO1P15559 274 aaKnown RBP23.29■■□□□ 1.32
TTC3-210ENST00000450533 POLR2BP30876 1174 aaKnown RBP23.29■■□□□ 1.32
TTC3-210ENST00000450533 NRLP54845 237 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 FNBP1LQ5T0N5 605 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 TSHZ1Q6ZSZ6 1077 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 POLNQ7Z5Q5 900 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 TDRPQ86YL5 185 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 KLHL29Q96CT2 875 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 PTPRHQ9HD43 1115 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.29■■□□□ 1.32
TTC3-210ENST00000450533 MGAMO43451 1857 aa23.29■■□□□ 1.32
TTC3-210ENST00000450533 POLR2AP24928 1970 aaKnown RBP23.29■■□□□ 1.32
TTC3-210ENST00000450533 ERBB2P04626 1255 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 CA4P22748 312 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 PROZP22891 400 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 NR1H3Q13133 447 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 TFDP1Q14186 410 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 DPH6Q7L8W6 267 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 CCDC91Q7Z6B0 441 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 ANKLE1Q8NAG6 615 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 DENND1AQ8TEH3 1009 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 CPT1BQ92523 772 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 COPS5Q92905 334 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 PPP1R16BQ96T49 567 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 SMYD3Q9H7B4 428 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 GPRC5DQ9NZD1 345 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 SIX4Q9UIU6 781 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 FARP1Q9Y4F1 1045 aaPredicted RBP23.28■■□□□ 1.32
TTC3-210ENST00000450533 BRCA1P38398 1863 aaKnown RBP23.28■■□□□ 1.32
TTC3-210ENST00000450533 CLUHO75153 1309 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 ACKR2O00590 384 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 NFICP08651 508 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 KDELR1P24390 212 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 RAD23BP54727 409 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 GBP7Q8N8V2 638 aaPredicted RBP23.28■■□□□ 1.32
TTC3-210ENST00000450533 HSPH1Q92598 858 aa23.28■■□□□ 1.32
TTC3-210ENST00000450533 IGKV6-21A0A0C4DH24 114 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 TCRBV7S3A2A0A539 114 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 B4GALT4O60513 344 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 IQCF3P0C7M6 154 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 SLC1A5Q15758 541 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 ZNF667Q5HYK9 610 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 RSAD2Q8WXG1 361 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 MAK16Q9BXY0 300 aaKnown RBP23.27■■□□□ 1.32
TTC3-210ENST00000450533 CDT1Q9H211 546 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 KRT7P08729 469 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 RPL22P35268 128 aaKnown RBP23.27■■□□□ 1.32
TTC3-210ENST00000450533 SPARCL1Q14515 664 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 HADHQ16836 314 aaKnown RBP23.27■■□□□ 1.32
TTC3-210ENST00000450533 PREPLQ4J6C6 727 aaPredicted RBP23.27■■□□□ 1.32
TTC3-210ENST00000450533 XYLT1Q86Y38 959 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 UNC45BQ8IWX7 931 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 C1orf127Q8N9H9 656 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 PYROXD1Q8WU10 500 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 SPATA33Q96N06 139 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 C2orf40Q9H1Z8 148 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 UBN1Q9NPG3 1134 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 PHTF1Q9UMS5 762 aa23.27■■□□□ 1.32
TTC3-210ENST00000450533 PIK3R2O00459 728 aa23.26■■□□□ 1.31
TTC3-210ENST00000450533 PRPF4O43172 522 aaKnown RBP eCLIP23.26■■□□□ 1.315e-17■■□□□ 14.5
TTC3-210ENST00000450533 MYO1EQ12965 1108 aa23.26■■□□□ 1.31
TTC3-210ENST00000450533 RFX6Q8HWS3 928 aa23.26■■□□□ 1.31
TTC3-210ENST00000450533 FBXO16Q8IX29 292 aaPredicted RBP23.26■■□□□ 1.31
TTC3-210ENST00000450533 PPIL6Q8IXY8 311 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms