RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 DCLK2Q8N568 766 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 MAB21L3Q8N8X9 362 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 FSIP1Q8NA03 581 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 HPDLQ96IR7 371 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 GKN1Q9NS71 199 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 HSPBP1Q9NZL4 362 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 GTF3C4Q9UKN8 822 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 CDH9Q9ULB4 789 aa17.5■□□□□ 0.39
CTDSP1-204ENST00000443891 CCDC163A0A0D9SF12 145 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 FOXD2O60548 495 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 ATG13O75143 517 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 TCF3P15923 654 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 SOX9P48436 509 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 ASIC1P78348 528 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 SATB1Q01826 763 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 FAM160A1Q05DH4 1040 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 SOWAHAQ2M3V2 549 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 FAM26FQ5R3K3 315 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 TXNDC11Q6PKC3 985 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 UNC13DQ70J99 1090 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 KIAA1958Q8N8K9 716 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 USP13Q92995 863 aaPredicted RBP17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 ZFYVE19Q96K21 471 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 SPATA17Q96L03 361 aa17.49■□□□□ 0.39
CTDSP1-204ENST00000443891 PVALEFA0A1B0GWK0 134 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 TRDMT1O14717 391 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 RETP07949 1114 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 USP17L7P0C7H9 530 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 WARSP23381 471 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 CYP2F1P24903 491 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 GRSF1Q12849 480 aaKnown RBP eCLIP17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 PON2Q15165 354 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 TMEM196Q5HYL7 178 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 HS2ST1Q7LGA3 356 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 NOC3LQ8WTT2 800 aaKnown RBP17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 DHX58Q96C10 678 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 FNBP1Q96RU3 617 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 MAGEC2Q9UBF1 373 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 MAGED2Q9UNF1 606 aaPredicted RBP17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 GPR179Q6PRD1 2367 aa17.48■□□□□ 0.39
CTDSP1-204ENST00000443891 TCHHQ07283 1943 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 CACNA1AO00555 2505 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 K7ESF4 209 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 TULP1O00294 542 aaPredicted RBP17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 TACC1O75410 805 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 PPP3CCP48454 512 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 EHHADHQ08426 723 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 PSMD6Q15008 389 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 SNRNP35Q16560 246 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 DDR2Q16832 855 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 FBXO43Q4G163 708 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 TXNDC8Q6A555 127 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 TRAPPC11Q7Z392 1133 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 OSTM1Q86WC4 334 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 CBWD2Q8IUF1 395 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 GPIHBP1Q8IV16 184 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 C12orf56Q8IXR9 622 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 XXYLT1Q8NBI6 393 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 OR5B17Q8NGF7 314 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 CCDC26Q8TAB7 109 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 SYT15Q9BQS2 421 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 AGPAT3Q9NRZ7 376 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 RBM12Q9NTZ6 932 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 FAM13BQ9NYF5 915 aa17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
CTDSP1-204ENST00000443891 TRAV19A0A0A6YYK7 116 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 TGFB1I1O43294 461 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 STAU1O95793 577 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 DRD1P21728 446 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 ACAT1P24752 427 aaKnown RBP17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 HOXD13P35453 343 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 GPR15P49685 360 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 TNK2Q07912 1038 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 SIM2Q14190 667 aaPredicted RBP17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 BMT2Q1RMZ1 405 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 SHC4Q6S5L8 630 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 WDR5BQ86VZ2 330 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 CPA6Q8N4T0 437 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 GOLGA5Q8TBA6 731 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 KBTBD7Q8WVZ9 684 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 CGRRF1Q99675 332 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 HPS4Q9NQG7 708 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 CFAP45Q9UL16 551 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 CCL26Q9Y258 94 aa17.46■□□□□ 0.39
CTDSP1-204ENST00000443891 CHURC1-FNTBB4DL54 471 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 TRIM66O15016 1216 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 TADA3O75528 432 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 ZSCAN22P10073 491 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 TNNI1P19237 187 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 TGM1P22735 817 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 ATICP31939 592 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 AP3M2P53677 418 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 NR1H3Q13133 447 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 MTF1Q14872 753 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 RSPO4Q2I0M5 234 aaPredicted RBP17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 WDR44Q5JSH3 913 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 Q6ZS52 159 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 SCN4BQ8IWT1 228 aa17.45■□□□□ 0.38
CTDSP1-204ENST00000443891 CAMKK1Q8N5S9 505 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms