RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ECEL1O95672 775 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 ITGA4P13612 1032 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 RRM1P23921 792 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 ASPAP45381 313 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 RNASE9P60153 205 aaKnown RBP9.67□□□□□ -0.86
HDAC6-209ENST00000440653 COPS2P61201 443 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 TFAMQ00059 246 aaKnown RBP9.67□□□□□ -0.86
HDAC6-209ENST00000440653 CAV1Q03135 178 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 ZNF211Q13398 564 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-209ENST00000440653 STILQ15468 1287 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 PTPROQ16827 1216 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 OLFML2BQ68BL8 750 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 DUPD1Q68J44 220 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 IQSEC1Q6DN90 963 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 SPOPLQ6IQ16 392 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 TMC3Q7Z5M5 1100 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 DPP9Q86TI2 863 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 HOOK3Q86VS8 718 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 ARFGAP2Q8N6H7 521 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 NIPA2Q8N8Q9 360 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 C3orf20Q8ND61 904 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 OR6J1Q8NGC5 347 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 EXD1Q8NHP7 514 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 CCHCR1Q8TD31 782 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 COPS5Q92905 334 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 ZIM3Q96PE6 472 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 TSPAN18Q96SJ8 248 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 C11orf70Q9BRQ4 267 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 TINF2Q9BSI4 451 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 DNAI2Q9GZS0 605 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 XYLT2Q9H1B5 865 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 MTIF3Q9H2K0 278 aaKnown RBP9.67□□□□□ -0.86
HDAC6-209ENST00000440653 PDZD7Q9H5P4 517 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 LRRC19Q9H756 370 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 ACP6Q9NPH0 428 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-209ENST00000440653 NCOR2Q9Y618 2525 aa9.67□□□□□ -0.86
HDAC6-209ENST00000440653 SRRM3A6NNA2 597 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 H3BRB1 525 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 FSCN2O14926 492 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 PPFIA2O75334 1257 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 ZNF286BP0CG31 522 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 CXCL8P10145 99 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 ATP2A2P16615 1042 aaKnown RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 GRM5P41594 1212 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 MARCKSL1P49006 195 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 LMAN1P49257 510 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 CDK7P50613 346 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 GUCY2FP51841 1108 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 CDR1P51861 262 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 ACLYP53396 1101 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 MYL6P60660 151 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 IRX5P78411 483 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 LMNB2Q03252 620 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 ZP2Q05996 745 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 CALCOCO2Q13137 446 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 PIGHQ14442 188 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 SLMAPQ14BN4 828 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 TMEM132DQ14C87 1099 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 GRIK4Q16099 956 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 AMHR2Q16671 573 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 SGO2Q562F6 1265 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 CCDC137Q6PK04 289 aaKnown RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 MTHFD1LQ6UB35 978 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 MMS22LQ6ZRQ5 1243 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 POLNQ7Z5Q5 900 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 RNF180Q86T96 592 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 IQCKQ8N0W5 287 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 PRELID2Q8N945 189 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 TSEN2Q8NCE0 465 aaKnown RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 BBOF1Q8ND07 529 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 FEZF2Q8TBJ5 459 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 FNIP1Q8TF40 1166 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 AFG1LQ8WV93 481 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 TRAPPC12Q8WVT3 735 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 ZNF606Q8WXB4 792 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 MAGOHBQ96A72 148 aaKnown RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 VWCEQ96DN2 955 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 CYFIP2Q96F07 1278 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 GDAP1L1Q96MZ0 367 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 SCLT1Q96NL6 688 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 C16orf70Q9BSU1 422 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 KATNAL1Q9BW62 490 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 LHX5Q9H2C1 402 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 TUT1Q9H6E5 874 aaKnown RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 IFT122Q9HBG6 1241 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.861e-15■■■■■ 67.3
HDAC6-209ENST00000440653 PDGFCQ9NRA1 345 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 DDX56Q9NY93 547 aaKnown RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 MUTYHQ9UIF7 546 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 COL4A4P53420 1690 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-209ENST00000440653 KMT2EQ8IZD2 1858 aa9.66□□□□□ -0.86
HDAC6-209ENST00000440653 NRCAMQ92823 1304 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 PRR23AA6NEV1 266 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 ZBBXA8MT70 800 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 H0Y858 1186 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 TLR3O15455 904 aaKnown RBP9.65□□□□□ -0.86
HDAC6-209ENST00000440653 B4GALT5O43286 388 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 DAPK3O43293 454 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms