RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 SPTLC2O15270 562 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 LRP3O75074 770 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 NOL4O94818 638 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 RETP07949 1114 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 GRSF1Q12849 480 aaKnown RBP eCLIP17.36■□□□□ 0.376e-7■□□□□ 10
ACTB-205ENST00000432588 RUNX3Q13761 415 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 ZNF268Q14587 947 aaPredicted RBP17.36■□□□□ 0.37
ACTB-205ENST00000432588 DUOXA2Q1HG44 320 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 WDR44Q5JSH3 913 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 SDHAF4Q5VUM1 108 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 C4orf50Q6ZRC1 276 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 EXOC4Q96A65 974 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 HPDLQ96IR7 371 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 ZNF396Q96N95 335 aaPredicted RBP17.36■□□□□ 0.37
ACTB-205ENST00000432588 PKMYT1Q99640 499 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 KBTBD4Q9NVX7 518 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 CCL26Q9Y258 94 aa17.36■□□□□ 0.37
ACTB-205ENST00000432588 EIF3DO15371 548 aaKnown RBP eCLIP17.35■□□□□ 0.37
ACTB-205ENST00000432588 PPP6R2O75170 966 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 HOXA6P31267 233 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 DMWDQ09019 674 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 SPEM2Q0P670 501 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 PDGFRLQ15198 375 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 MAPRE1Q15691 268 aaKnown RBP17.35■□□□□ 0.37
ACTB-205ENST00000432588 SOWAHAQ2M3V2 549 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 LMBRD2Q68DH5 695 aaPredicted RBP17.35■□□□□ 0.37
ACTB-205ENST00000432588 HEATR6Q6AI08 1181 aaKnown RBP17.35■□□□□ 0.37
ACTB-205ENST00000432588 FSIP1Q8NA03 581 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 IQUBQ8NA54 791 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 STKLD1Q8NE28 680 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 FAM84AQ96KN4 292 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 MYRFLQ96LU7 910 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 TRIM9Q9C026 710 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 EBF3Q9H4W6 596 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 HSPBP1Q9NZL4 362 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 NCOR2Q9Y618 2525 aa17.35■□□□□ 0.37
ACTB-205ENST00000432588 TRAV19A0A0A6YYK7 116 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 MED19A0JLT2 244 aaPredicted RBP17.34■□□□□ 0.37
ACTB-205ENST00000432588 HRO43593 1189 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 ATG13O75143 517 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 CKMP06732 381 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 TGM1P22735 817 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 MAGEA11P43364 429 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 ASIC1P78348 528 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 FAM160A1Q05DH4 1040 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 TMEM196Q5HYL7 178 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 TRIM68Q6AZZ1 485 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 CEP68Q76N32 757 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.34■□□□□ 0.37
ACTB-205ENST00000432588 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 CBWD2Q8IUF1 395 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 WDR49Q8IV35 697 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 SCN4BQ8IWT1 228 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 OR5B17Q8NGF7 314 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 TRPC7Q9HCX4 862 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 HPS4Q9NQG7 708 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 CDH9Q9ULB4 789 aa17.34■□□□□ 0.37
ACTB-205ENST00000432588 PTPRJQ12913 1337 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 TRDMT1O14717 391 aaKnown RBP17.33■□□□□ 0.36
ACTB-205ENST00000432588 CUTAO60888 179 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 YEATS4O95619 227 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 USP17L7P0C7H9 530 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 E2F4Q16254 413 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 FAM26FQ5R3K3 315 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 SCARA3Q6AZY7 606 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 FAM171BQ6P995 826 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 VSTM1Q6UX27 236 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 WDR5BQ86VZ2 330 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 CPA6Q8N4T0 437 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 GLIS3Q8NEA6 775 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 TTC16Q8NEE8 873 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 HPS3Q969F9 1004 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 DHX58Q96C10 678 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 CEP295NLQ96MC4 621 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 MMS19Q96T76 1030 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 SYT15Q9BQS2 421 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 PARD6AQ9NPB6 346 aa17.33■□□□□ 0.36
ACTB-205ENST00000432588 TFIP11Q9UBB9 837 aaKnown RBP17.33■□□□□ 0.36
ACTB-205ENST00000432588 MAGEC2Q9UBF1 373 aaPredicted RBP17.33■□□□□ 0.36
ACTB-205ENST00000432588 UBE4BO95155 1302 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 FOXD2O60548 495 aaPredicted RBP17.32■□□□□ 0.36
ACTB-205ENST00000432588 TADA3O75528 432 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 PDIA4P13667 645 aaKnown RBP17.32■□□□□ 0.36
ACTB-205ENST00000432588 ARSAP15289 507 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 PDE6CP51160 858 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 ATXN1P54253 815 aaKnown RBP17.32■□□□□ 0.36
ACTB-205ENST00000432588 SNRPFP62306 86 aaKnown RBP17.32■□□□□ 0.36
ACTB-205ENST00000432588 SRSF5Q13243 272 aaKnown RBP17.32■□□□□ 0.36
ACTB-205ENST00000432588 KCNB1Q14721 858 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 MTF1Q14872 753 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
ACTB-205ENST00000432588 CNNM4Q6P4Q7 775 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 LIMS2Q7Z4I7 341 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 ZNF507Q8TCN5 953 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 FNBP1Q96RU3 617 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 RTKNQ9BST9 563 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 BACH2Q9BYV9 841 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 MAGEF1Q9HAY2 307 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 C2orf42Q9NWW7 574 aa17.32■□□□□ 0.36
ACTB-205ENST00000432588 EHD2Q9NZN4 543 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms