RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 ORC1Q13415 861 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 CFAP221Q4G0U5 840 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 KLHDC7AQ5VTJ3 777 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 RRAGAQ7L523 313 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 SLC4A11Q8NBS3 891 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 CCDC150Q8NCX0 1101 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.24□□□□□ -0.29
USP40-205ENST00000430158 C2orf15Q8WU43 125 aaKnown RBP13.24□□□□□ -0.29
USP40-205ENST00000430158 JAKMIP2Q96AA8 810 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 PCED1BQ96HM7 432 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 ERGIC2Q96RQ1 377 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 B3GNT5Q9BYG0 378 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 GANQ9H2C0 597 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 ADAM7Q9H2U9 754 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 ABCB6Q9NP58 842 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 PLCB1Q9NQ66 1216 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 ZDHHC7Q9NXF8 308 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 CDH22Q9UJ99 828 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 DENND4AQ7Z401 1863 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 UNC80Q8N2C7 3258 aa13.24□□□□□ -0.29
USP40-205ENST00000430158 TCF20Q9UGU0 1960 aaKnown RBP13.23□□□□□ -0.29
USP40-205ENST00000430158 BECN2A8MW95 431 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 EPHB6O15197 1021 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 C8AP07357 584 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP40-205ENST00000430158 CD58P19256 250 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 CDK11BP21127 795 aaKnown RBP13.23□□□□□ -0.29
USP40-205ENST00000430158 MAGEA11P43364 429 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 NR1I3Q14994 352 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 NFE2Q16621 373 aaPredicted RBP13.23□□□□□ -0.29
USP40-205ENST00000430158 MDH1BQ5I0G3 518 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 SMYD5Q6GMV2 418 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 GPR149Q86SP6 731 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 ACOT1Q86TX2 421 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 FUKQ8N0W3 1084 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 PPM1KQ8N3J5 372 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 TTC39CQ8N584 583 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 SLC7A14Q8TBB6 771 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 SPPL2BQ8TCT7 592 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 SHC3Q92529 594 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 MYLPFQ96A32 169 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 FUBP3Q96I24 572 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP40-205ENST00000430158 ZSWIM1Q9BR11 485 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 NT5C1AQ9BXI3 368 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 PRKD2Q9BZL6 878 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 SFXN1Q9H9B4 322 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 UBE2TQ9NPD8 197 aaPredicted RBP13.23□□□□□ -0.29
USP40-205ENST00000430158 CEP72Q9P209 647 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 APEX2Q9UBZ4 518 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 CD207Q9UJ71 328 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 SLC27A5Q9Y2P5 690 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 INSL5Q9Y5Q6 135 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 BDP1A6H8Y1 2624 aa13.23□□□□□ -0.29
USP40-205ENST00000430158 CCDC195A0A1B0GUA6 201 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 SOAT2O75908 522 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 ATF6P18850 670 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 CYP2F1P24903 491 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 PBX1P40424 430 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 CACNA2D1P54289 1103 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 FANCCQ00597 558 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 SKIV2LQ15477 1246 aaKnown RBP13.22□□□□□ -0.29
USP40-205ENST00000430158 RARS2Q5T160 578 aaKnown RBP13.22□□□□□ -0.29
USP40-205ENST00000430158 IQCEQ6IPM2 695 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 TMC5Q6UXY8 1006 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 CCDC149Q6ZUS6 474 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 C12orf29Q8N999 325 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 LRRC3Q9BY71 257 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 DPP7Q9UHL4 492 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 YIPF1Q9Y548 306 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 PCDHB5Q9Y5E4 795 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 PATJQ8NI35 1801 aa13.22□□□□□ -0.29
USP40-205ENST00000430158 ANAPC1Q9H1A4 1944 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 CLDN5O00501 218 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 NRG2O14511 850 aaPredicted RBP13.21□□□□□ -0.29
USP40-205ENST00000430158 MBTPS2O43462 519 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 SRGAP2BP0DMP2 458 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 UCHL3P15374 230 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 GPR15P49685 360 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 ITIH3Q06033 890 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 SMAD4Q13485 552 aaKnown RBP13.21□□□□□ -0.29
USP40-205ENST00000430158 SYCP1Q15431 976 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 MAPRE1Q15691 268 aaKnown RBP13.21□□□□□ -0.29
USP40-205ENST00000430158 CLUL1Q15846 466 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 PPM1LQ5SGD2 360 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 LIN9Q5TKA1 542 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 CYP26C1Q6V0L0 522 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 ZMIZ2Q8NF64 920 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 ANKRD20A12PQ8NF67 263 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 TFAP2BQ92481 460 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 TMEM176AQ96HP8 235 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 TNIP3Q96KP6 325 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 HNRNPABQ99729 332 aaKnown RBP13.21□□□□□ -0.29
USP40-205ENST00000430158 APOL5Q9BWW9 433 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 LSM14BQ9BX40 385 aaKnown RBP13.21□□□□□ -0.29
USP40-205ENST00000430158 ZNF518BQ9C0D4 1074 aa13.21□□□□□ -0.29
USP40-205ENST00000430158 RBSNQ9H1K0 784 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms