RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 SHC3Q92529 594 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 SPATA17Q96L03 361 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 C8orf48Q96LL4 319 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 PGLYRP2Q96PD5 576 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 B3GNT5Q9BYG0 378 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 UBXN6Q9BZV1 441 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 CRISPLD1Q9H336 500 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 DPEP3Q9H4B8 488 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 CSNK1G1Q9HCP0 422 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.9■□□□□ 0.14
GARNL3-204ENST00000429629 ATP8B3O60423 1300 aa15.9■□□□□ 0.14
GARNL3-204ENST00000429629 GRXCR2A6NFK2 248 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 TRIM66O15016 1216 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 MBTPS2O43462 519 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 HCRTO43612 131 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 RFPL2O75678 378 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 EPHA5P54756 1037 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 PSMC1P62191 440 aaKnown RBP15.89■□□□□ 0.13
GARNL3-204ENST00000429629 SMAD2Q15796 467 aaKnown RBP15.89■□□□□ 0.13
GARNL3-204ENST00000429629 MEA1Q16626 185 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 MDH1BQ5I0G3 518 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 EP400NLQ6ZTU2 488 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 PAQR9Q6ZVX9 377 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 FUKQ8N0W3 1084 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 ELMOD1Q8N336 334 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 MYLPFQ96A32 169 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 CYFIP2Q96F07 1278 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 ZNF512Q96ME7 567 aaPredicted RBP15.89■□□□□ 0.13
GARNL3-204ENST00000429629 HEXIM2Q96MH2 286 aaKnown RBP15.89■□□□□ 0.13
GARNL3-204ENST00000429629 TWNKQ96RR1 684 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 STK33Q9BYT3 514 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 EDEM3Q9BZQ6 932 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 WDR6Q9NNW5 1121 aaKnown RBP15.89■□□□□ 0.13
GARNL3-204ENST00000429629 PNPLA8Q9NP80 782 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 COMMD8Q9NX08 183 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 ABI2Q9NYB9 513 aaPredicted RBP15.89■□□□□ 0.13
GARNL3-204ENST00000429629 EHD2Q9NZN4 543 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 HMGXB4Q9UGU5 601 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 YIPF1Q9Y548 306 aa15.89■□□□□ 0.13
GARNL3-204ENST00000429629 VWA8A3KMH1 1905 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 SPDYE4A6NLX3 237 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 H3BQ06 376 aaPredicted RBP15.88■□□□□ 0.13
GARNL3-204ENST00000429629 NOL4O94818 638 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 FGF19O95750 216 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 TPM3P06753 285 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 PTPN2P17706 415 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 CYP2F1P24903 491 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 UBASH3AP57075 661 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 BPIFB4P59827 614 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 CYP27A1Q02318 531 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 TWF1Q12792 350 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 VEPH1Q14D04 833 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 SYCP1Q15431 976 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 CNGA2Q16280 664 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 MGAT5BQ3V5L5 792 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 RARS2Q5T160 578 aaKnown RBP15.88■□□□□ 0.13
GARNL3-204ENST00000429629 IQCEQ6IPM2 695 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 TMEM270Q6UE05 265 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 TMC5Q6UXY8 1006 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 C12orf76Q8N812 135 aaPredicted RBP15.88■□□□□ 0.13
GARNL3-204ENST00000429629 SMG7Q92540 1137 aaKnown RBP15.88■□□□□ 0.13
GARNL3-204ENST00000429629 KAT5Q92993 513 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 PSMG2Q969U7 264 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 IQCDQ96DY2 449 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 SMARCD1Q96GM5 515 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 MYRFLQ96LU7 910 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 NAP1L5Q96NT1 182 aaPredicted RBP15.88■□□□□ 0.13
GARNL3-204ENST00000429629 SLC27A5Q9Y2P5 690 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 PCDHB4Q9Y5E5 795 aa15.88■□□□□ 0.13
GARNL3-204ENST00000429629 SOBPA7XYQ1 873 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 ZNF197O14709 1029 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 CSH1P0DML2 217 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 CSH2P0DML3 217 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 BDNFP23560 247 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 SGO2Q562F6 1265 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 FIGNQ5HY92 759 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 FMNL3Q8IVF7 1028 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 FAM71AQ8IYT1 594 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 C12orf29Q8N999 325 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 ANKRD52Q8NB46 1076 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 ASB2Q96Q27 587 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 LSM14BQ9BX40 385 aaKnown RBP15.87■□□□□ 0.13
GARNL3-204ENST00000429629 GANQ9H2C0 597 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 PRKAG3Q9UGI9 489 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 MYO6Q9UM54 1294 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 USTQ9Y2C2 406 aa15.87■□□□□ 0.13
GARNL3-204ENST00000429629 USP15Q9Y4E8 981 aaPredicted RBP15.87■□□□□ 0.13
GARNL3-204ENST00000429629 COL6A3P12111 3177 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 RNF225M0QZC1 329 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 FOXN3O00409 490 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 TEX33O43247 280 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 CBFA2T2O43439 604 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 CBX2Q14781 532 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 ZNF394Q53GI3 561 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 PTCRAQ6ISU1 281 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 SARM1Q6SZW1 724 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 LCLAT1Q6UWP7 414 aa15.86■□□□□ 0.13
GARNL3-204ENST00000429629 DNAJB7Q7Z6W7 309 aaPredicted RBP15.86■□□□□ 0.13
GARNL3-204ENST00000429629 FAM35AQ86V20 835 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms