RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PDZK1Q5T2W1 519 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 TIGD7Q6NT04 549 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 BNC2Q6ZN30 1099 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-203ENST00000427191 PLEKHF1Q96S99 279 aa14.99□□□□□ -0.01
PTPN13-203ENST00000427191 ADGRA2Q96PE1 1338 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 HARS2P49590 506 aaKnown RBP14.98□□□□□ -0.01
PTPN13-203ENST00000427191 TIMM50Q3ZCQ8 353 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 CDC73Q6P1J9 531 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 XRRA1Q6P2D8 792 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 MMGT1Q8N4V1 131 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 STARD8Q92502 1023 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 PDLIM2Q96JY6 352 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 NOD2Q9HC29 1040 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 MAN1C1Q9NR34 630 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 SPASTQ9UBP0 616 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 SLC16A1P53985 500 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 LONRF1Q17RB8 773 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 SCUBE1Q8IWY4 988 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 NT5C1AQ9BXI3 368 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 RPS6KB2Q9UBS0 482 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 KLHL20Q9Y2M5 609 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 PDGFRAP16234 1089 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 WARSP23381 471 aaKnown RBP14.98□□□□□ -0.01
PTPN13-203ENST00000427191 CAAP1Q9H8G2 361 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 VTA1Q9NP79 307 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 WWOXQ9NZC7 414 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 IGSF9BQ9UPX0 1349 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 TWF1Q12792 350 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 ZNF746Q6NUN9 644 aaPredicted RBP14.98□□□□□ -0.01
PTPN13-203ENST00000427191 BARGINQ6ZT62 677 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 EMILIN2Q9BXX0 1053 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 TMEM8AQ9HCN3 771 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 VAV3Q9UKW4 847 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 DRG1Q9Y295 367 aaKnown RBP14.98□□□□□ -0.01
PTPN13-203ENST00000427191 FAM220BPB1ANY3 271 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 MOCS2O96007 188 aaPredicted RBP14.98□□□□□ -0.01
PTPN13-203ENST00000427191 KRT6AP02538 564 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 ZNF23P17027 643 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 GRK2P25098 689 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 CENPAP49450 140 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 CHI3L2Q15782 390 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 TRPC7Q9HCX4 862 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 COMMD8Q9NX08 183 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 STK39Q9UEW8 545 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 ERFEQ4G0M1 354 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 LRRC6Q86X45 466 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 PPP1R36Q96LQ0 422 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 MCEEQ96PE7 176 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 GPR63Q9BZJ6 419 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 TET3O43151 1660 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 IFNGR2P38484 337 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 PTGER2P43116 358 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 CCDC144BQ3MJ40 725 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 JAMLQ86YT9 394 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 UNC5CLQ8IV45 518 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 EXD1Q8NHP7 514 aa14.98□□□□□ -0.01
PTPN13-203ENST00000427191 THUMPD3Q9BV44 507 aaKnown RBP14.98□□□□□ -0.01
PTPN13-203ENST00000427191 CLEC16AQ2KHT3 1053 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 DCP1BQ8IZD4 617 aaKnown RBP14.97□□□□□ -0.01
PTPN13-203ENST00000427191 CHAMP1Q96JM3 812 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 GANQ9H2C0 597 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 SNPHO15079 494 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 PRKAB2O43741 272 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 DARSP14868 501 aaKnown RBP14.97□□□□□ -0.01
PTPN13-203ENST00000427191 NCOA4Q13772 614 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 SPANXN2Q5MJ10 180 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 RNFT2Q96EX2 444 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 SLITRK2Q9H156 845 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 SLC40A1Q9NP59 571 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 RNF146Q9NTX7 359 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 MROH7-TTC4A0A0A0MT08 1334 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 VPS4BO75351 444 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 KATNA1O75449 491 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 GSTA3Q16772 222 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 PUS3Q9BZE2 481 aaKnown RBP14.97□□□□□ -0.01
PTPN13-203ENST00000427191 RBP1P09455 135 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 IFNEQ86WN2 208 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 LPAR1Q92633 364 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 MEI4A8MW99 385 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 TMEM253P0C7T8 217 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 AKAP5P24588 427 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 CRKP46108 304 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 CSE1LP55060 971 aaKnown RBP14.97□□□□□ -0.01
PTPN13-203ENST00000427191 FBXW10Q5XX13 1052 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 CDH24Q86UP0 819 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 DYNLL2Q96FJ2 89 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 PPP1R16BQ96T49 567 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 C17orf75Q9HAS0 396 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 CD209Q9NNX6 404 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 CDHR2Q9BYE9 1310 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 VPS26AO75436 327 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 NFIAQ12857 509 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 TOB2Q14106 344 aaPredicted RBP14.97□□□□□ -0.01
PTPN13-203ENST00000427191 SEL1L3Q68CR1 1132 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 SWSAP1Q6NVH7 229 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 TRAPPC9Q96Q05 1148 aa14.97□□□□□ -0.01
PTPN13-203ENST00000427191 ZNF862O60290 1169 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 WDR72Q3MJ13 1102 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 BOLA3Q53S33 107 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms