RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 TMEM270Q6UE05 265 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 SLC7A14Q8TBB6 771 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 PCED1BQ96HM7 432 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 HEXIM2Q96MH2 286 aaKnown RBP18.09■□□□□ 0.49
FOXN4-203ENST00000423960 CD320Q9NPF0 282 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 FAM207AQ9NSI2 230 aaPredicted RBP18.09■□□□□ 0.49
FOXN4-203ENST00000423960 IFNKQ9P0W0 207 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 HSFX1Q9UBD0 423 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 TCF20Q9UGU0 1960 aaKnown RBP18.09■□□□□ 0.49
FOXN4-203ENST00000423960 TSC2P49815 1807 aa18.09■□□□□ 0.49
FOXN4-203ENST00000423960 BDP1A6H8Y1 2624 aa18.08■□□□□ 0.49
FOXN4-203ENST00000423960 NOL4O94818 638 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 UCHL3P15374 230 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 RFX1P22670 979 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 PUS10Q3MIT2 529 aaKnown RBP18.08■□□□□ 0.48
FOXN4-203ENST00000423960 SMYD5Q6GMV2 418 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 C12orf76Q8N812 135 aaPredicted RBP18.08■□□□□ 0.48
FOXN4-203ENST00000423960 C12orf29Q8N999 325 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 SLC4A11Q8NBS3 891 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 NEK11Q8NG66 645 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 MYLPFQ96A32 169 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 FUBP3Q96I24 572 aaKnown RBP eCLIP18.08■□□□□ 0.48
FOXN4-203ENST00000423960 B3GNT5Q9BYG0 378 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 GANQ9H2C0 597 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 CRISPLD1Q9H336 500 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 ABCB6Q9NP58 842 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 ZDHHC7Q9NXF8 308 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 CNTN6Q9UQ52 1028 aa18.08■□□□□ 0.48
FOXN4-203ENST00000423960 CCDC195A0A1B0GUA6 201 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 A0A1W2PQC6 194 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 RNF225M0QZC1 329 aaPredicted RBP18.07■□□□□ 0.48
FOXN4-203ENST00000423960 CBFA2T2O43439 604 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 RFPL2O75678 378 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 HNRNPA1P09651 372 aaKnown RBP eCLIP18.07■□□□□ 0.48
FOXN4-203ENST00000423960 HAPLN1P10915 354 aaPredicted RBP18.07■□□□□ 0.48
FOXN4-203ENST00000423960 KRT5P13647 590 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 CYP2F1P24903 491 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 ALDH1A3P47895 512 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 MGAT5BQ3V5L5 792 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 CFAP221Q4G0U5 840 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 SYCE2Q6PIF2 218 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 TTC9BQ8N6N2 239 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 RBBP8NLQ8NC74 664 aaPredicted RBP18.07■□□□□ 0.48
FOXN4-203ENST00000423960 MSLNLQ96KJ4 702 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 SEPT5Q99719 369 aaPredicted RBP18.07■□□□□ 0.48
FOXN4-203ENST00000423960 MED10Q9BTT4 135 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 NAA15Q9BXJ9 866 aaKnown RBP18.07■□□□□ 0.48
FOXN4-203ENST00000423960 STK33Q9BYT3 514 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 SFXN1Q9H9B4 322 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 AJAP1Q9UKB5 411 aaPredicted RBP18.07■□□□□ 0.48
FOXN4-203ENST00000423960 KIAA1257Q9ULG3 409 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 DAAM1Q9Y4D1 1078 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 INSL5Q9Y5Q6 135 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 FHOD1Q9Y613 1164 aa18.07■□□□□ 0.48
FOXN4-203ENST00000423960 BRWD1Q9NSI6 2320 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 ATP8B3O60423 1300 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 FOXN3O00409 490 aaPredicted RBP18.06■□□□□ 0.48
FOXN4-203ENST00000423960 CLDN5O00501 218 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 TPM3P06753 285 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 PAEPP09466 180 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 BDNFP23560 247 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 HOXA9P31269 272 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 USP8P40818 1118 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 MAGEA11P43364 429 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 POLR2FP61218 127 aaKnown RBP18.06■□□□□ 0.48
FOXN4-203ENST00000423960 PLCB2Q00722 1185 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 RAPGEF1Q13905 1077 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 DRAP1Q14919 205 aaPredicted RBP18.06■□□□□ 0.48
FOXN4-203ENST00000423960 PTPN21Q16825 1174 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 RARS2Q5T160 578 aaKnown RBP18.06■□□□□ 0.48
FOXN4-203ENST00000423960 CMASQ8NFW8 434 aaPredicted RBP18.06■□□□□ 0.48
FOXN4-203ENST00000423960 SHC3Q92529 594 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 CYFIP2Q96F07 1278 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 APOL5Q9BWW9 433 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 PRKD2Q9BZL6 878 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 XPO4Q9C0E2 1151 aaKnown RBP18.06■□□□□ 0.48
FOXN4-203ENST00000423960 S1PR5Q9H228 398 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 FAM49BQ9NUQ9 324 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 CD207Q9UJ71 328 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 YIPF1Q9Y548 306 aa18.06■□□□□ 0.48
FOXN4-203ENST00000423960 EPHB6O15197 1021 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 SOAT2O75908 522 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 LRG1P02750 347 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 VDRP11473 427 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 CCDC130P13994 396 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 CD19P15391 556 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 SSTR3P32745 418 aaPredicted RBP18.05■□□□□ 0.48
FOXN4-203ENST00000423960 ZNF132P52740 706 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 ITIH3Q06033 890 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 TWF1Q12792 350 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 PLD1Q13393 1074 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 VSTM1Q6UX27 236 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 TMC5Q6UXY8 1006 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 CYP26C1Q6V0L0 522 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 PAQR9Q6ZVX9 377 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 FUKQ8N0W3 1084 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 GJD3Q8N144 294 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 SLC2A14Q8TDB8 520 aa18.05■□□□□ 0.48
FOXN4-203ENST00000423960 KHSRPQ92945 711 aaKnown RBP eCLIP18.05■□□□□ 0.48
FOXN4-203ENST00000423960 HNRNPABQ99729 332 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms