RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 VNN1O95497 513 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 CSH1P0DML2 217 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 CSH2P0DML3 217 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 SRFP11831 508 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 ATF6P18850 670 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 ANXA13P27216 316 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 CDC25CP30307 473 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 MXI1P50539 228 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 FOXK1P85037 733 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 CYP27A1Q02318 531 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 TEAD2Q15562 447 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 CCDC40Q4G0X9 1142 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 DCAF17Q5H9S7 520 aaPredicted RBP11.68□□□□□ -0.54
USP49-204ENST00000423567 FAM171BQ6P995 826 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 PARM1Q6UWI2 310 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 SCARA5Q6ZMJ2 495 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 HFE2Q6ZVN8 426 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 BMP8AQ7Z5Y6 402 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 SCN4BQ8IWT1 228 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 MYCBPAPQ8TBZ2 947 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 GIPC2Q8TF65 315 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 NELFBQ8WX92 580 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 FGF14Q92915 247 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 MYLPFQ96A32 169 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 EEF2KMTQ96G04 330 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 TNIP3Q96KP6 325 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
USP49-204ENST00000423567 UXTQ9UBK9 157 aaPredicted RBP11.68□□□□□ -0.54
USP49-204ENST00000423567 ARMCX3Q9UH62 379 aaPredicted RBP11.68□□□□□ -0.54
USP49-204ENST00000423567 CTNND2Q9UQB3 1225 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 C5orf42Q9H799 3197 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 MUC3AQ02505 3323 aa11.68□□□□□ -0.54
USP49-204ENST00000423567 ATP8B3O60423 1300 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 ATP2C2O75185 946 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 ECI2O75521 394 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 ASS1P00966 412 aaKnown RBP11.67□□□□□ -0.54
USP49-204ENST00000423567 GJA1P17302 382 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 PTPN1P18031 435 aaKnown RBP11.67□□□□□ -0.54
USP49-204ENST00000423567 COL9A1P20849 921 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 RFX1P22670 979 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 CYP2F1P24903 491 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 GABRR2P28476 465 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 GRIK1P39086 918 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 CCR2P41597 374 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 MAGEA11P43364 429 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 PMS1P54277 932 aaKnown RBP11.67□□□□□ -0.54
USP49-204ENST00000423567 NOP14P78316 857 aaKnown RBP11.67□□□□□ -0.54
USP49-204ENST00000423567 PPP3CAQ08209 521 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 PAK1Q13153 545 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 MDH1BQ5I0G3 518 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 WDR44Q5JSH3 913 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 C1orf220Q5T0J3 134 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 VSTM1Q6UX27 236 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 CLEC17AQ6ZS10 378 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 TMC8Q8IU68 726 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 ZC3H3Q8IXZ2 948 aaKnown RBP11.67□□□□□ -0.54
USP49-204ENST00000423567 FBXL6Q8N531 539 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 ST13P5Q8NFI4 369 aaPredicted RBP11.67□□□□□ -0.54
USP49-204ENST00000423567 SHKBP1Q8TBC3 707 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 TAS1R2Q8TE23 839 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 SMARCD2Q92925 531 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 E2F7Q96AV8 911 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 CEP63Q96MT8 703 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 PKMYT1Q99640 499 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 KXD1Q9BQD3 176 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 SMOC2Q9H3U7 446 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 SMYD3Q9H7B4 428 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 ZFP14Q9HCL3 533 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 CRTAC1Q9NQ79 661 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 EHD2Q9NZN4 543 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 ZMYM5Q9UJ78 669 aa11.67□□□□□ -0.54
USP49-204ENST00000423567 MAGED2Q9UNF1 606 aaPredicted RBP11.67□□□□□ -0.54
USP49-204ENST00000423567 PPP1R3GB7ZBB8 358 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 DPYSL4O14531 572 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 TRIM66O15016 1216 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 NARSO43776 548 aaKnown RBP11.66□□□□□ -0.54
USP49-204ENST00000423567 FGFR1OPO95684 399 aaKnown RBP11.66□□□□□ -0.54
USP49-204ENST00000423567 CFHP08603 1231 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 BDNFP23560 247 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 RAP1GAPP47736 663 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 GPR15P49685 360 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 CDH8P55286 799 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 PFKPQ01813 784 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 CETN1Q12798 172 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 DDR2Q16832 855 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 FAM78AQ5JUQ0 283 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 GPR158Q5T848 1215 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 SPOPLQ6IQ16 392 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 FOXR2Q6PJQ5 311 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 FRMD5Q7Z6J6 570 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 FILIP1Q7Z7B0 1213 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 UNC93AQ86WB7 457 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 TTC39CQ8N584 583 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 B3GALNT2Q8NCR0 500 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 FBXL13Q8NEE6 735 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 ZSCAN18Q8TBC5 510 aaPredicted RBP11.66□□□□□ -0.54
USP49-204ENST00000423567 GPR152Q8TDT2 470 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 ELSPBP1Q96BH3 223 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 ASIC4Q96FT7 647 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms