RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 EOMESO95936 686 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 THP07101 528 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 KCNE1P15382 129 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 WDR5P61964 334 aaKnown RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 SLMAPQ14BN4 828 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 HGSNATQ68CP4 663 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 GLB1LQ6UWU2 654 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 CACNA2D4Q7Z3S7 1137 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 PPM1KQ8N3J5 372 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 CENPTQ96BT3 561 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 MS4A14Q96JA4 679 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 SEC16BQ96JE7 1060 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 PBKQ96KB5 322 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 APOBEC3GQ9HC16 384 aaKnown RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 IL23AQ9NPF7 189 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 PPANQ9NQ55 473 aaKnown RBP13.64□□□□□ -0.23
LINC00642-201ENST00000419459 LRFN2Q9ULH4 789 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 TRANK1O15050 2925 aa13.64□□□□□ -0.23
LINC00642-201ENST00000419459 GSTA1P08263 222 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 SKIP12755 728 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 UCHL3P15374 230 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 HSD17B3P37058 310 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 SCTRP47872 440 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 CLCNKBP51801 687 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 NOP14P78316 857 aaKnown RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 MRPS25P82663 173 aaKnown RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 CETN1Q12798 172 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 TRPC3Q13507 836 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 RAPGEF1Q13905 1077 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 C10orf76Q5T2E6 689 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 RPUSD2Q8IZ73 545 aaKnown RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 ABI1Q8IZP0 508 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 HASPINQ8TF76 798 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 XYLT2Q9H1B5 865 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 GANQ9H2C0 597 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 CENPHQ9H3R5 247 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 APEX2Q9UBZ4 518 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 UBQLN1Q9UMX0 589 aaKnown RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 NUB1Q9Y5A7 615 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 COL4A6Q14031 1691 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 ESYT3A0FGR9 886 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 CCDC188H7C350 402 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 RAD51CO43502 376 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 PALMO75781 387 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 DDHD2O94830 711 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 HPDP32754 393 aaPredicted RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 PBX3P40426 434 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 POU5F1Q01860 360 aaKnown RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 GFPT1Q06210 699 aaPredicted RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 ENPEPQ07075 957 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 IFI16Q16666 785 aaKnown RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 ARHGAP44Q17R89 818 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 WDR72Q3MJ13 1102 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 C3orf58Q8NDZ4 430 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 CCHCR1Q8TD31 782 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 TAF4BQ92750 862 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 BATF3Q9NR55 127 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 TBC1D13Q9NVG8 400 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 NXF1Q9UBU9 619 aaKnown RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 DNAJB4Q9UDY4 337 aa13.63□□□□□ -0.23
LINC00642-201ENST00000419459 TPX2Q9ULW0 747 aaKnown RBP13.63□□□□□ -0.23
LINC00642-201ENST00000419459 ABHD14A-ACY1A0A1B0GW23 586 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 CCDC189A1A4V9 331 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 ZSCAN5CA6NGD5 496 aaPredicted RBP13.62□□□□□ -0.23
LINC00642-201ENST00000419459 PPP1R12AO14974 1030 aaPredicted RBP13.62□□□□□ -0.23
LINC00642-201ENST00000419459 P4HA2O15460 535 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 BUB1O43683 1085 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 CTNNA1P35221 906 aaKnown RBP13.62□□□□□ -0.23
LINC00642-201ENST00000419459 EIF3BP55884 814 aaKnown RBP13.62□□□□□ -0.23
LINC00642-201ENST00000419459 RNASELQ05823 741 aaKnown RBP13.62□□□□□ -0.23
LINC00642-201ENST00000419459 ZNF844Q08AG5 666 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 RIPK1Q13546 671 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 SLC18A3Q16572 532 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 ZNF699Q32M78 642 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 TLDC1Q6P9B6 456 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 CEP57Q86XR8 500 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 BEST2Q8NFU1 509 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 ACTRT1Q8TDG2 376 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 UBE2TQ9NPD8 197 aaPredicted RBP13.62□□□□□ -0.23
LINC00642-201ENST00000419459 POLIQ9UNA4 740 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 C5orf42Q9H799 3197 aa13.62□□□□□ -0.23
LINC00642-201ENST00000419459 PRUNE2Q8WUY3 3088 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 PMM2O15305 246 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 ASS1P00966 412 aaKnown RBP13.61□□□□□ -0.23
LINC00642-201ENST00000419459 ITGB1P05556 798 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 ECHS1P30084 290 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 AP3M2P53677 418 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 ARID5AQ03989 594 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 PPIGQ13427 754 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00642-201ENST00000419459 HLTFQ14527 1009 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00642-201ENST00000419459 TDRD12Q587J7 1177 aaKnown RBP13.61□□□□□ -0.23
LINC00642-201ENST00000419459 NOMO2Q5JPE7 1267 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 TMEM240Q5SV17 173 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 SFMBT2Q5VUG0 894 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 MAB21L3Q8N8X9 362 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms