RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 VPS16Q9H269 839 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 APEX2Q9UBZ4 518 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 NOTCH4Q99466 2003 aa16.44■□□□□ 0.22
TRAPPC12-203ENST00000411973 CCL16O15467 120 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 ACO1P21399 889 aaKnown RBP16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 CYP2F1P24903 491 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 EPHB3P54753 998 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 KCNMA1Q12791 1236 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 DPY19L2P1Q6NXN4 242 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 ENOSF1Q7L5Y1 443 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 KREMEN1Q96MU8 473 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 SEPT5Q99719 369 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 LPIN3Q9BQK8 851 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 B3GNT5Q9BYG0 378 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 ELOVL4Q9GZR5 314 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 PIDD1Q9HB75 910 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 CEP72Q9P209 647 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 CDH22Q9UJ99 828 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 ASB3Q9Y575 518 aa16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 TCF20Q9UGU0 1960 aaKnown RBP16.43■□□□□ 0.22
TRAPPC12-203ENST00000411973 LGALS16A8MUM7 142 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 PES1O00541 588 aaKnown RBP16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 IL9P15248 144 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 PTPN2P17706 415 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 ALDH1A3P47895 512 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 RAD23BP54727 409 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 ZNF445P59923 1031 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 CYP27A1Q02318 531 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 MGAT5BQ3V5L5 792 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 FKBP15Q5T1M5 1219 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 RRAGAQ7L523 313 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 SLC4A11Q8NBS3 891 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 KAT5Q92993 513 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 TMEM176AQ96HP8 235 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 CEP295NLQ96MC4 621 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 WDR6Q9NNW5 1121 aaKnown RBP16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 SIX2Q9NPC8 291 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 UBE2TQ9NPD8 197 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 AVENQ9NQS1 362 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 MYH10P35580 1976 aa16.42■□□□□ 0.22
TRAPPC12-203ENST00000411973 GREB1Q4ZG55 1949 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 TTC28Q96AY4 2481 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 VCANP13611 3396 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 SOAT2O75908 522 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 ATF6P18850 670 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 CDR1P51861 262 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 RPL10AP62906 217 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 ORC1Q13415 861 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 TJAP1Q5JTD0 557 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 IQCEQ6IPM2 695 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 PAQR9Q6ZVX9 377 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 GRASPQ7Z6J2 395 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 FUKQ8N0W3 1084 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 ELMOD1Q8N336 334 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 C12orf29Q8N999 325 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 PSMG2Q969U7 264 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 ZNF512Q96ME7 567 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 HNRNPABQ99729 332 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 PHF7Q9BWX1 381 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 POMKQ9H5K3 350 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 DNMT3BQ9UBC3 853 aaKnown RBP16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 PRKAG3Q9UGI9 489 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 CNTN6Q9UQ52 1028 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 DOCK8Q8NF50 2099 aa16.41■□□□□ 0.22
TRAPPC12-203ENST00000411973 BDNFP23560 247 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 EPHA5P54756 1037 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 MFAP3P55082 362 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 TPM4P67936 248 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 APBA1Q02410 837 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 ZNF394Q53GI3 561 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 TMEM270Q6UE05 265 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 DNAJB7Q7Z6W7 309 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 ITIH5Q86UX2 942 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 LEMD2Q8NC56 503 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 CYFIP2Q96F07 1278 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 C8orf48Q96LL4 319 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 ZNF518BQ9C0D4 1074 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 PLCB1Q9NQ66 1216 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 HCFC1R1Q9NWW0 138 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 A0A0C4DFX4 3053 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 ATP8B3O60423 1300 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 CLUHO75153 1309 aa16.4■□□□□ 0.22
TRAPPC12-203ENST00000411973 GOLGA6L19H0YKK7 550 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 CLDN5O00501 218 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 TRIM66O15016 1216 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 PAEPP09466 180 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 RFX1P22670 979 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 ZNF132P52740 706 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 VEPH1Q14D04 833 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 DDR2Q16832 855 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 PABPC1LQ4VXU2 614 aaKnown RBP16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 GJB7Q6PEY0 223 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 FAM35AQ86V20 835 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 SLC2A14Q8TDB8 520 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 SMARCD1Q96GM5 515 aa16.39■□□□□ 0.21
TRAPPC12-203ENST00000411973 SPATA17Q96L03 361 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms