RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 UNC93AQ86WB7 457 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 CRYBG2Q8N1P7 616 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 TNIP3Q96KP6 325 aa20.48■□□□□ 0.87
RTN4-207ENST00000402434 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.48■□□□□ 0.878e-8■■■■■ 43.4
RTN4-207ENST00000402434 CCDC192P0DO97 292 aa20.47■□□□□ 0.87
RTN4-207ENST00000402434 MYL4P12829 197 aa20.47■□□□□ 0.87
RTN4-207ENST00000402434 WDR44Q5JSH3 913 aa20.47■□□□□ 0.87
RTN4-207ENST00000402434 ING5Q8WYH8 240 aa20.47■□□□□ 0.87
RTN4-207ENST00000402434 EDAQ92838 391 aa20.47■□□□□ 0.87
RTN4-207ENST00000402434 ZNF334Q9HCZ1 680 aaPredicted RBP20.47■□□□□ 0.87
RTN4-207ENST00000402434 DACH1Q9UI36 760 aa20.47■□□□□ 0.87
RTN4-207ENST00000402434 P4HA2O15460 535 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 FGF19O95750 216 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 HMGA1P17096 107 aaKnown RBP20.46■□□□□ 0.87
RTN4-207ENST00000402434 CEBPBP17676 345 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 GPR15P49685 360 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 NDST1P52848 882 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 ZXDAP98168 799 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 CYP27A1Q02318 531 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 HTR4Q13639 388 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 DDR2Q16832 855 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 GAREM2Q75VX8 874 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 IRF2BP1Q8IU81 584 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 SHKBP1Q8TBC3 707 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 FAM200AQ8TCP9 573 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 GIPC2Q8TF65 315 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 CEP295NLQ96MC4 621 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 FAM124BQ9H5Z6 455 aaPredicted RBP20.46■□□□□ 0.87
RTN4-207ENST00000402434 PTPRDP23468 1912 aa20.46■□□□□ 0.87
RTN4-207ENST00000402434 CSH1P0DML2 217 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 CSH2P0DML3 217 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 BDNFP23560 247 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 KCNH2Q12809 1159 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 TDGQ13569 410 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 MTMR3Q13615 1198 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 UBALD2Q8IYN6 164 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 GPR152Q8TDT2 470 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 TATDN2Q93075 761 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 MCRS1Q96EZ8 462 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 C1QTNF1Q9BXJ1 281 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 IL21Q9HBE4 155 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 HMGXB4Q9UGU5 601 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 TECTAO75443 2155 aa20.45■□□□□ 0.86
RTN4-207ENST00000402434 PARM1Q6UWI2 310 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 ACOT1Q86TX2 421 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 SLC44A3Q8N4M1 653 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 WHAMMQ8TF30 809 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 RSAD2Q8WXG1 361 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 SPATA17Q96L03 361 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 MYRFLQ96LU7 910 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 B3GNT5Q9BYG0 378 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 GPR88Q9GZN0 384 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 ELOVL4Q9GZR5 314 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 C11orf16Q9NQ32 467 aa20.44■□□□□ 0.86
RTN4-207ENST00000402434 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.44■□□□□ 0.86
RTN4-207ENST00000402434 A0A1W2PRU2 124 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 CILPO75339 1184 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 NOL4O94818 638 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 GJA1P17302 382 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 GABRR2P28476 465 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 TAF12Q16514 161 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 CCDC183Q5T5S1 534 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 SDHAF4Q5VUM1 108 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 PAQR9Q6ZVX9 377 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 MTSS1LQ765P7 747 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 SCN4BQ8IWT1 228 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 TTC39CQ8N584 583 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 LMO3Q8TAP4 145 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 FGF14Q92915 247 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 TRMT2BQ96GJ1 504 aaKnown RBP20.43■□□□□ 0.86
RTN4-207ENST00000402434 NT5C1AQ9BXI3 368 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 ZNF518BQ9C0D4 1074 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 NUMBLQ9Y6R0 609 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 GPR37L1O60883 481 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 AFPP02771 609 aaKnown RBP20.43■□□□□ 0.86
RTN4-207ENST00000402434 GRIK1P39086 918 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 CETN1Q12798 172 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 TEAD2Q15562 447 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 TRIM67Q6ZTA4 783 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 TMEM150AQ86TG1 271 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 FUKQ8N0W3 1084 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 CNOT6LQ96LI5 555 aaKnown RBP20.43■□□□□ 0.86
RTN4-207ENST00000402434 C8orf48Q96LL4 319 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 ZSWIM3Q96MP5 696 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 TWNKQ96RR1 684 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 ARID3AQ99856 593 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 THAP9Q9H5L6 903 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 CISHQ9NSE2 258 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 TMEM30AQ9NV96 361 aa20.43■□□□□ 0.86
RTN4-207ENST00000402434 SLC38A8A6NNN8 435 aa20.42■□□□□ 0.86
RTN4-207ENST00000402434 CLDN5O00501 218 aa20.42■□□□□ 0.86
RTN4-207ENST00000402434 TRIM66O15016 1216 aa20.42■□□□□ 0.86
RTN4-207ENST00000402434 F11P03951 625 aa20.42■□□□□ 0.86
RTN4-207ENST00000402434 CD58P19256 250 aa20.42■□□□□ 0.86
RTN4-207ENST00000402434 CDC25CP30307 473 aa20.42■□□□□ 0.86
RTN4-207ENST00000402434 TPD52L1Q16890 204 aaPredicted RBP20.42■□□□□ 0.86
RTN4-207ENST00000402434 ASB16Q96NS5 453 aa20.42■□□□□ 0.86
RTN4-207ENST00000402434 RPP25Q9BUL9 199 aaKnown RBP20.42■□□□□ 0.86
RTN4-207ENST00000402434 TRPV4Q9HBA0 871 aa20.42■□□□□ 0.86
RTN4-207ENST00000402434 TMEM63CQ9P1W3 806 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms