RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 TMEM132DQ14C87 1099 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 DCAF12L1Q5VU92 463 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 ALKAL1Q6UXT8 129 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 SND1Q7KZF4 910 aaKnown RBP eCLIP19.41■□□□□ 0.7
MBD1-208ENST00000398493 PHOSPHO2Q8TCD6 241 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 IFT81Q8WYA0 676 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 ZNF689Q96CS4 500 aaPredicted RBP19.41■□□□□ 0.7
MBD1-208ENST00000398493 CASD1Q96PB1 797 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 SLC9A7Q96T83 725 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 MTIF3Q9H2K0 278 aaKnown RBP19.41■□□□□ 0.7
MBD1-208ENST00000398493 HCSTQ9UBK5 93 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 NXF1Q9UBU9 619 aaKnown RBP19.41■□□□□ 0.7
MBD1-208ENST00000398493 MTUS1Q9ULD2 1270 aa19.41■□□□□ 0.7
MBD1-208ENST00000398493 ARL5CA6NH57 179 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 NFICP08651 508 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 WEE2P0C1S8 567 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 OAS2P29728 719 aaKnown RBP19.4■□□□□ 0.7
MBD1-208ENST00000398493 PASD1Q8IV76 773 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 TMEM130Q8N3G9 435 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 C1orf127Q8N9H9 656 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 CAVIN3Q969G5 261 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 BTBD6Q96KE9 485 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 ZMAT2Q96NC0 199 aaKnown RBP19.4■□□□□ 0.7
MBD1-208ENST00000398493 C11orf70Q9BRQ4 267 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 DDX47Q9H0S4 455 aaKnown RBP19.4■□□□□ 0.7
MBD1-208ENST00000398493 CYP3A43Q9HB55 503 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 MED4Q9NPJ6 270 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 PARVAQ9NVD7 372 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 COLQQ9Y215 455 aaPredicted RBP19.4■□□□□ 0.7
MBD1-208ENST00000398493 INPP5FQ9Y2H2 1132 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 GIT1Q9Y2X7 761 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 C2CD2Q9Y426 696 aa19.4■□□□□ 0.7
MBD1-208ENST00000398493 COL4A6Q14031 1691 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 PTGESO14684 152 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 MYOGP15173 224 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 ASPAP45381 313 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 ZNF211Q13398 564 aaPredicted RBP19.39■□□□□ 0.7
MBD1-208ENST00000398493 WDR72Q3MJ13 1102 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 PAN2Q504Q3 1202 aaKnown RBP19.39■□□□□ 0.7
MBD1-208ENST00000398493 GLRA4Q5JXX5 417 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 GSPT2Q8IYD1 628 aaKnown RBP19.39■□□□□ 0.7
MBD1-208ENST00000398493 TTC39CQ8N584 583 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 WHAMMQ8TF30 809 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 KRT35Q92764 455 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 SNX27Q96L92 541 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 FAM124BQ9H5Z6 455 aaPredicted RBP19.39■□□□□ 0.7
MBD1-208ENST00000398493 PLEKHA5Q9HAU0 1116 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 ITGA11Q9UKX5 1188 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 PCDHGC3Q9UN70 934 aa19.39■□□□□ 0.7
MBD1-208ENST00000398493 UTP11Q9Y3A2 253 aaKnown RBP19.39■□□□□ 0.7
MBD1-208ENST00000398493 CHD9Q3L8U1 2897 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 TBKBP1A7MCY6 615 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 POMCP01189 267 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 ITGB3P05106 788 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 PAEPP09466 180 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 SCNN1GP51170 649 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 RBP5P82980 135 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 HTRA4P83105 476 aaPredicted RBP19.39■□□□□ 0.69
MBD1-208ENST00000398493 PLEKHA7Q6IQ23 1121 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 SCARA5Q6ZMJ2 495 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.39■□□□□ 0.69
MBD1-208ENST00000398493 RUNDC3BQ96NL0 473 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 BCO2Q9BYV7 579 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 VRTNQ9H8Y1 702 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 SIX4Q9UIU6 781 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 HPCAL4Q9UM19 191 aa19.39■□□□□ 0.69
MBD1-208ENST00000398493 ANK1P16157 1881 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 LCHNA4D1U4 455 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 CARSP49589 748 aaKnown RBP19.38■□□□□ 0.69
MBD1-208ENST00000398493 YARSP54577 528 aaKnown RBP19.38■□□□□ 0.69
MBD1-208ENST00000398493 ZNF394Q53GI3 561 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 XKR4Q5GH76 650 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 SCARA3Q6AZY7 606 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 MMS22LQ6ZRQ5 1243 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 HACE1Q8IYU2 909 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 MAIP1Q8WWC4 291 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 ZBED2Q9BTP6 218 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 RAB17Q9H0T7 212 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.38■□□□□ 0.69
MBD1-208ENST00000398493 NFU1Q9UMS0 254 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 DERAQ9Y315 318 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 SZT2Q5T011 3432 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 CHD7Q9P2D1 2997 aa19.38■□□□□ 0.69
MBD1-208ENST00000398493 B4GALT3O60512 393 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 PROSCO94903 275 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 CFHP08603 1231 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 MMP8P22894 467 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 BRD2P25440 801 aaKnown RBP19.37■□□□□ 0.69
MBD1-208ENST00000398493 PBX2P40425 430 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 MAMLD1Q13495 774 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 DHX34Q14147 1143 aaKnown RBP19.37■□□□□ 0.69
MBD1-208ENST00000398493 GLB1LQ6UWU2 654 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 CASKIN2Q8WXE0 1202 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 YME1L1Q96TA2 773 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 UBN1Q9NPG3 1134 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 DPP3Q9NY33 737 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 AMACRQ9UHK6 382 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 RASAL2Q9UJF2 1139 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 SMIM28A0A1B0GU29 152 aa19.37■□□□□ 0.69
MBD1-208ENST00000398493 FAM187AA6NFU0 413 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms