RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 MMP19Q99542 508 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 MRPL1Q9BYD6 325 aaKnown RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 KCTD10Q9H3F6 313 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 CCDC134Q9H6E4 229 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 DDX4Q9NQI0 724 aaKnown RBP17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 KCNQ5Q9NR82 932 aa17.08■□□□□ 0.32
CTDSP2-201ENST00000398073 ASB14A6NK59 587 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 LCA5LO95447 670 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 USP10Q14694 798 aaKnown RBP17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 CYTH1Q15438 398 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 SLC30A10Q6XR72 485 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 WARS2Q9UGM6 360 aaKnown RBP17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 ASTN1O14525 1302 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 MAGEB2O15479 319 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 GLRA3O75311 464 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 CYP3A7P24462 503 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 ALDH5A1P51649 535 aaPredicted RBP17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 DSG1Q02413 1049 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 THEM5Q8N1Q8 247 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 EME1Q96AY2 570 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 TRIM62Q9BVG3 475 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 TASP1Q9H6P5 420 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 PSMD3O43242 534 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 SHBGP04278 402 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 AUHQ13825 339 aaKnown RBP17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 RRP1BQ14684 758 aaKnown RBP17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 CNGA2Q16280 664 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 SCUBE1Q8IWY4 988 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 ABCF3Q9NUQ8 709 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 PECAM1P16284 738 aaPredicted RBP17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 PPARGP37231 505 aaPredicted RBP17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 FAXCQ5TGI0 409 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 STYK1Q6J9G0 422 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 CKAP2Q8WWK9 683 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 HPDLQ96IR7 371 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 TMEM120AQ9BXJ8 343 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 PLEKHA5Q9HAU0 1116 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 NSMCE4AQ9NXX6 385 aa17.07■□□□□ 0.32
CTDSP2-201ENST00000398073 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 ACADSBP45954 432 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 PREPLQ4J6C6 727 aaPredicted RBP17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 CCNJLQ8IV13 435 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 PRELID2Q8N945 189 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 SPIRE2Q8WWL2 714 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 PPP1R36Q96LQ0 422 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 SIK2Q9H0K1 926 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 CHST7Q9NS84 486 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 FAM49BQ9NUQ9 324 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 TAS2R14Q9NYV8 317 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 SNX2O60749 519 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 SHOX2O60902 331 aaPredicted RBP17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 DRD4P21917 467 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 RHBDL3P58872 404 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 OCA2Q04671 838 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 RASA2Q15283 850 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 LRRC71Q8N4P6 559 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 TMA16Q96EY4 203 aaKnown RBP17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 IFT43Q96FT9 208 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 TTYH3Q9C0H2 523 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 GAKO14976 1311 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 ATXN2Q99700 1313 aaKnown RBP17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 GNAT1P11488 350 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 RXRBP28702 533 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 PDK2Q15119 407 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 TMEM259Q4ZIN3 620 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 SEZ6Q53EL9 994 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 HGSNATQ68CP4 663 aa17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 CRELD2Q6UXH1 353 aaPredicted RBP17.06■□□□□ 0.32
CTDSP2-201ENST00000398073 NLRP11P59045 1033 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 SWT1Q5T5J6 900 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 GRAMD4Q6IC98 578 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 APBB2Q92870 758 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 PDCD2LQ9BRP1 358 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 NAT9Q9BTE0 207 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 NFIBO00712 420 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 FDFT1P37268 417 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 TSPY1Q01534 308 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 PPHLN1Q8NEY8 458 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 SYTL5Q8TDW5 730 aaPredicted RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 CISHQ9NSE2 258 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 MTFR1Q15390 333 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 NIPA1Q7RTP0 329 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 CHST13Q8NET6 341 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 ZNF526Q8TF50 670 aaPredicted RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 ZNF669Q96BR6 464 aaPredicted RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 SNX5Q9Y5X3 404 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 E2F6O75461 281 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 PPP3CAQ08209 521 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 TRMT5Q32P41 509 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 HYIQ5T013 277 aa17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 SPOUT1Q5T280 376 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 ZCCHC9Q8N567 271 aaKnown RBP17.05■□□□□ 0.32
CTDSP2-201ENST00000398073 ZNF606Q8WXB4 792 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms