RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 LGR6Q9HBX8 967 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 FAM217BQ9NTX9 383 aaPredicted RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 SNX12Q9UMY4 172 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 MYH14Q7Z406 1995 aaKnown RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 SFSWAPQ12872 951 aaKnown RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 PABPC5Q96DU9 382 aaKnown RBP10.71□□□□□ -0.69
COL4A4-201ENST00000396625 ZHX2Q9Y6X8 837 aa10.71□□□□□ -0.69
COL4A4-201ENST00000396625 MEI4A8MW99 385 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 POTEIP0CG38 1075 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 RGS2P41220 211 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 HIST2H2ACQ16777 129 aaPredicted RBP10.71□□□□□ -0.7
COL4A4-201ENST00000396625 HIST2H2AA3Q6FI13 130 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 POTEGQ6S5H5 508 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 ATG16L2Q8NAA4 619 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 ADI1Q9BV57 179 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 ITSN1Q15811 1721 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 HPGDP15428 266 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 NEDD8Q15843 81 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 SDE2Q6IQ49 451 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 ZNF579Q8NAF0 562 aaKnown RBP10.71□□□□□ -0.7
COL4A4-201ENST00000396625 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.71□□□□□ -0.7
COL4A4-201ENST00000396625 E2F7Q96AV8 911 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 MAP3K20Q9NYL2 800 aaKnown RBP10.71□□□□□ -0.7
COL4A4-201ENST00000396625 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.71□□□□□ -0.7
COL4A4-201ENST00000396625 SIK3Q9Y2K2 1263 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 RAD51BO15315 384 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 CCDC80Q76M96 950 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 UTP15Q8TED0 518 aaKnown RBP10.71□□□□□ -0.7
COL4A4-201ENST00000396625 PPP1R14BQ96C90 147 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 SH3BP4Q9P0V3 963 aa10.71□□□□□ -0.7
COL4A4-201ENST00000396625 FAM58BPP0C7Q3 252 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 SCTRP47872 440 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 MKRN4PQ13434 485 aaPredicted RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 GLYCTKQ8IVS8 523 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 DDX18Q9NVP1 670 aaKnown RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ERBB4Q15303 1308 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ITIH2P19823 946 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 STAT5AP42229 794 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 STAT5BP51692 787 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 PSMC5P62195 406 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 EIF2B5Q13144 721 aaKnown RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 SLC44A2Q8IWA5 706 aaPredicted RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ZNF302Q9NR11 478 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 COMMD9Q9P000 198 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 RABGEF1Q9UJ41 708 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 SNX8Q9Y5X2 465 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 NUP153P49790 1475 aaKnown RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 KNL1Q8NG31 2342 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 PRR23AA6NEV1 266 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 MZF1P28698 734 aaPredicted RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 IL5RAQ01344 420 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 RHAGQ02094 409 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 PIGHQ14442 188 aaPredicted RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 C2CD6Q53TS8 623 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 TCEAL5Q5H9L2 206 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 MROH9Q5TGP6 573 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 IZUMO2Q6UXV1 221 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 VCPKMTQ9H867 229 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 SPACA6W5XKT8 324 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 GNG14A0A1W2PPG7 69 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ALDH1A1P00352 501 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 CYBBP04839 570 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 IL13P35225 146 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 RCVRNP35243 200 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 NPEPPSP55786 919 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 NME5P56597 212 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 TRAP1Q12931 704 aaKnown RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 DGUOKQ16854 277 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 UGT3A1Q6NUS8 523 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 CAMKK2Q96RR4 588 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 RMDN3Q96TC7 470 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ADGRG1Q9Y653 693 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 LOC100653049A0A140TA62 436 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 EFCAB10A6NFE3 127 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 FAM220BPB1ANY3 271 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 EXTL3O43909 919 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 IREB2P48200 963 aaKnown RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 FNTAP49354 379 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ZNF614Q8N883 585 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 C1orf50Q9BV19 199 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ETAA1Q9NY74 926 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ARF4P18085 180 aaPredicted RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 TGM2P21980 687 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 CASP12Q6UXS9 341 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 IPMKQ8NFU5 416 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 DCAF4Q8WV16 495 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 DCUN1D5Q9BTE7 237 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 GRID1Q9ULK0 1009 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 STAT3P40763 770 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 SRP54P61011 504 aaKnown RBP10.7□□□□□ -0.7
COL4A4-201ENST00000396625 TRAF3Q13114 568 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 PTGISQ16647 500 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 DUOXA2Q1HG44 320 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 ZRANB3Q5FWF4 1079 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 LINC00523Q86TU6 105 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 SCFD2Q8WU76 684 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 KIF12Q96FN5 646 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 CYP39A1Q9NYL5 469 aa10.7□□□□□ -0.7
COL4A4-201ENST00000396625 PCP4L1A6NKN8 68 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms