RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 VAT1Q99536 393 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 SPATC1LQ9H0A9 340 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 AVENQ9NQS1 362 aaPredicted RBP16.28■□□□□ 0.2
GNE-202ENST00000396594 RAD54BQ9Y620 910 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 ALG6Q9Y672 507 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 FRMPD4Q14CM0 1322 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 CTDNEP1O95476 244 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 VCAM1P19320 739 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 CASP1P29466 404 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 EPHB3P54753 998 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 FMR1Q06787 632 aaKnown RBP eCLIP16.28■□□□□ 0.2
GNE-202ENST00000396594 CYP24A1Q07973 514 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 ZNF268Q14587 947 aaPredicted RBP16.28■□□□□ 0.2
GNE-202ENST00000396594 USP10Q14694 798 aaKnown RBP16.28■□□□□ 0.2
GNE-202ENST00000396594 CDC26Q8NHZ8 85 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 SPATA18Q8TC71 538 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 SLC24A2Q9UI40 661 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 SNUPNO95149 360 aaKnown RBP16.28■□□□□ 0.2
GNE-202ENST00000396594 KRT4P19013 534 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 COMTP21964 271 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 GIT2Q14161 759 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 TMEM117Q9H0C3 514 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 SYTL2Q9HCH5 934 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 MAPRE3Q9UPY8 281 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 C5orf58C9J3I9 102 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 CRTAMO95727 393 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 THP07101 528 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 MAGEA4P43358 317 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 NR2C2P49116 596 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 TGM3Q08188 693 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 MGAT5BQ3V5L5 792 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 THEMIS2Q5TEJ8 643 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 LRRC8EQ6NSJ5 796 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 TRIM65Q6PJ69 517 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 ANGPTL8Q6UXH0 198 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 SHCBP1Q8NEM2 672 aa16.28■□□□□ 0.2
GNE-202ENST00000396594 POLRMTO00411 1230 aaKnown RBP16.27■□□□□ 0.2
GNE-202ENST00000396594 SRP72O76094 671 aaKnown RBP16.27■□□□□ 0.2
GNE-202ENST00000396594 OR1G1P47890 313 aa16.27■□□□□ 0.2
GNE-202ENST00000396594 ARMC6Q6NXE6 501 aa16.27■□□□□ 0.2
GNE-202ENST00000396594 FAM43BQ6ZT52 329 aaPredicted RBP16.27■□□□□ 0.2
GNE-202ENST00000396594 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.2
GNE-202ENST00000396594 DDX53Q86TM3 631 aaKnown RBP16.27■□□□□ 0.2
GNE-202ENST00000396594 NOP9Q86U38 636 aaKnown RBP16.27■□□□□ 0.2
GNE-202ENST00000396594 TPCN2Q8NHX9 752 aa16.27■□□□□ 0.2
GNE-202ENST00000396594 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.2
GNE-202ENST00000396594 PKD2L2Q9NZM6 624 aa16.27■□□□□ 0.2
GNE-202ENST00000396594 DNPEPQ9ULA0 475 aa16.27■□□□□ 0.2
GNE-202ENST00000396594 TTC7AQ9ULT0 858 aaPredicted RBP16.27■□□□□ 0.2
GNE-202ENST00000396594 MAGED2Q9UNF1 606 aaPredicted RBP16.27■□□□□ 0.2
GNE-202ENST00000396594 ATRNO75882 1429 aa16.27■□□□□ 0.2
GNE-202ENST00000396594 TCRBV5S4A2TA0A5A2 114 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 TKTP29401 623 aaKnown RBP16.27■□□□□ 0.19
GNE-202ENST00000396594 SERPINB8P50452 374 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 PRKCQQ04759 706 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 TMEM119Q4V9L6 283 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 BEND6Q5SZJ8 279 aaPredicted RBP16.27■□□□□ 0.19
GNE-202ENST00000396594 PTRHD1Q6GMV3 140 aaKnown RBP16.27■□□□□ 0.19
GNE-202ENST00000396594 OXCT2Q9BYC2 517 aaPredicted RBP16.27■□□□□ 0.19
GNE-202ENST00000396594 LRRC40Q9H9A6 602 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 TRHDEQ9UKU6 1024 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 NPHP3-ACAD11A0A0J9YXS1 232 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 FAM95CA0A1B0GW59 222 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 PI4K2BG5E9Z4 385 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 M0R3G1 203 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 OPLAHO14841 1288 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 RBP3P10745 1247 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 RXRGP48443 463 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 WDCPQ9H6R7 721 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 CASS4Q9NQ75 786 aa16.27■□□□□ 0.19
GNE-202ENST00000396594 SALL3Q9BXA9 1300 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 NPTX2P47972 431 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 TFDP3Q5H9I0 405 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 HP1BP3Q5SSJ5 553 aaPredicted RBP16.26■□□□□ 0.19
GNE-202ENST00000396594 DDIASQ8IXT1 998 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 SEPT5Q99719 369 aaPredicted RBP16.26■□□□□ 0.19
GNE-202ENST00000396594 TARS2Q9BW92 718 aaKnown RBP16.26■□□□□ 0.19
GNE-202ENST00000396594 PRDM5Q9NQX1 630 aaPredicted RBP16.26■□□□□ 0.19
GNE-202ENST00000396594 AMACRQ9UHK6 382 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 CASP7P55210 303 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 NFIAQ12857 509 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 TP53BP2Q13625 1128 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 NT5DC1Q5TFE4 455 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 ZC3H18Q86VM9 953 aaKnown RBP16.26■□□□□ 0.19
GNE-202ENST00000396594 TADA1Q96BN2 335 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 ELMO2Q96JJ3 720 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 ECT2Q9H8V3 914 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 NAGPAQ9UK23 515 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 STARD13Q9Y3M8 1113 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 USP15Q9Y4E8 981 aaPredicted RBP16.26■□□□□ 0.19
GNE-202ENST00000396594 PCDHB12Q9Y5F1 795 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 SLC4A7Q9Y6M7 1214 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 HEATR9A2RTY3 570 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 SRGAP2O75044 1071 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 RBP1P09455 135 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 NCKAP1LP55160 1127 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 PDCLQ13371 301 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 TRIM69Q86WT6 500 aa16.26■□□□□ 0.19
GNE-202ENST00000396594 LRRC49Q8IUZ0 686 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms