RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 GPR62Q9BZJ7 368 aa6.7□□□□□ -1.34
PTPN20-208ENST00000395727 CCSER1Q9C0I3 900 aa6.7□□□□□ -1.34
PTPN20-208ENST00000395727 MAN1C1Q9NR34 630 aa6.7□□□□□ -1.34
PTPN20-208ENST00000395727 SLC38A7Q9NVC3 462 aa6.7□□□□□ -1.34
PTPN20-208ENST00000395727 LARSQ9P2J5 1176 aaKnown RBP6.7□□□□□ -1.34
PTPN20-208ENST00000395727 FBXW11Q9UKB1 542 aa6.7□□□□□ -1.34
PTPN20-208ENST00000395727 PDCD11Q14690 1871 aaKnown RBP6.7□□□□□ -1.34
PTPN20-208ENST00000395727 C2orf16Q68DN1 1984 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 TMEM221A6NGB7 291 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 CCDC169A6NNP5 214 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 F8W810 466 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 M0R296 226 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 TRAPPC3O43617 180 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 TADA2AO75478 443 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 ADRB2P07550 413 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 HNRNPA1P09651 372 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTPN20-208ENST00000395727 PLA2G4BP0C869 781 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 CDC25AP30304 524 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 RPL9P32969 192 aaKnown RBP6.69□□□□□ -1.34
PTPN20-208ENST00000395727 CA8P35219 290 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 UBA7P41226 1012 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 YARSP54577 528 aaKnown RBP6.69□□□□□ -1.34
PTPN20-208ENST00000395727 POU5F1Q01860 360 aaKnown RBP6.69□□□□□ -1.34
PTPN20-208ENST00000395727 MCL1Q07820 350 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 NOLC1Q14978 699 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTPN20-208ENST00000395727 UPP1Q16831 310 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 ARSHQ5FYA8 562 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 RTP2Q5QGT7 225 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 MEI1Q5TIA1 1274 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 DCLRE1AQ6PJP8 1040 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 OTOP3Q7RTS5 596 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 TAS1R1Q7RTX1 841 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 FBXL6Q8N531 539 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 LNX1Q8TBB1 728 aaPredicted RBP6.69□□□□□ -1.34
PTPN20-208ENST00000395727 STK35Q8TDR2 534 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 STAMQ92783 540 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 FAM122AQ96E09 287 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 CALML4Q96GE6 196 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 CRELD1Q96HD1 420 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 KIFC3Q9BVG8 833 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 BACH2Q9BYV9 841 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 ST6GALNAC4Q9H4F1 302 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 PLEKHA5Q9HAU0 1116 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 WDR6Q9NNW5 1121 aaKnown RBP6.69□□□□□ -1.34
PTPN20-208ENST00000395727 BLOC1S4Q9NUP1 217 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 IGSF9Q9P2J2 1179 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 MTRRQ9UBK8 725 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 BACE2Q9Y5Z0 518 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 ZFP37Q9Y6Q3 630 aaPredicted RBP6.69□□□□□ -1.34
PTPN20-208ENST00000395727 CLUHO75153 1309 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 ZNF318Q5VUA4 2279 aa6.69□□□□□ -1.34
PTPN20-208ENST00000395727 VWA8A3KMH1 1905 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 MTCL1Q9Y4B5 1905 aaKnown RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 TECTAO75443 2155 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SMIM28A0A1B0GU29 152 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CASTOR2A6NHX0 329 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SYN3O14994 580 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SLC16A4O15374 487 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CLDN3O15551 220 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 TGM5O43548 720 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 FAM189A1O60320 539 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 TBC1D4O60343 1298 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 PAGE1O75459 146 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SSBP05455 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CELA3AP09093 270 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CYP3A5P20815 502 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 NME2P22392 152 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 PAX3P23760 479 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 ARNTP27540 789 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 ST13P50502 369 aaKnown RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 STRN3Q13033 797 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 RESTQ13127 1097 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 RAB33AQ14088 237 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 PTPAQ15257 358 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 PSMD5Q16401 504 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 UVSSAQ2YD98 709 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 EXOSC6Q5RKV6 272 aaKnown RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 ANKRD34AQ69YU3 496 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SLC8B1Q6J4K2 584 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CD300LGQ6UXG3 332 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 TMC5Q6UXY8 1006 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 ANKS3Q6ZW76 656 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SV2BQ7L1I2 683 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 SULF2Q8IWU5 870 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 C12orf76Q8N812 135 aaPredicted RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 KREMEN2Q8NCW0 462 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 LRRC15Q8TF66 581 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 RIN2Q8WYP3 895 aaPredicted RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 LARP4BQ92615 738 aaKnown RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 RAD54LQ92698 747 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 ZNF707Q96C28 371 aaPredicted RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 HVCN1Q96D96 273 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 ACAP3Q96P50 834 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
PTPN20-208ENST00000395727 FIZ1Q96SL8 496 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CLSTN3Q9BQT9 956 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 CORO1BQ9BR76 489 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 REEP2Q9BRK0 252 aa6.68□□□□□ -1.34
PTPN20-208ENST00000395727 TARS2Q9BW92 718 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms