RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 WDR75Q8IWA0 830 aaKnown RBP16.89■□□□□ 0.29
PCDH1-203ENST00000394536 NDUFAF2Q8N183 169 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 ZBTB10Q96DT7 871 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 VPS11Q9H270 941 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 DHX35Q9H5Z1 703 aaKnown RBP16.89■□□□□ 0.29
PCDH1-203ENST00000394536 KAT6AQ92794 2004 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 CFLARO15519 480 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 CETPP11597 493 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 GRAMD1BQ3KR37 738 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 ZACNQ401N2 412 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 BZW1Q7L1Q6 419 aaKnown RBP16.89■□□□□ 0.29
PCDH1-203ENST00000394536 AKT1S1Q96B36 256 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 PPP1R36Q96LQ0 422 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 MYH11P35749 1972 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 C2orf71A6NGG8 1288 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 CALB2P22676 271 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
PCDH1-203ENST00000394536 TRIM42Q8IWZ5 723 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 SLC26A7Q8TE54 656 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 CRYGNQ8WXF5 182 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 CDKL2Q92772 493 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 TMEM120AQ9BXJ8 343 aa16.89■□□□□ 0.29
PCDH1-203ENST00000394536 FBXO6Q9NRD1 293 aaPredicted RBP16.89■□□□□ 0.29
PCDH1-203ENST00000394536 GLI3P10071 1580 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 STK10O94804 968 aaKnown RBP16.88■□□□□ 0.29
PCDH1-203ENST00000394536 PTPN4P29074 926 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 MMP14P50281 582 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 HADHBP55084 474 aaKnown RBP16.88■□□□□ 0.29
PCDH1-203ENST00000394536 ZNF268Q14587 947 aaPredicted RBP16.88■□□□□ 0.29
PCDH1-203ENST00000394536 CHI3L2Q15782 390 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 OTOAQ7RTW8 1153 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 DNAAF3Q8N9W5 541 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 SLITRK1Q96PX8 696 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 HERPUD2Q9BSE4 406 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 TEX13BQ9BXU2 312 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 RNPEPL1Q9HAU8 725 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 ZCCHC18P0CG32 403 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 GSCP56915 257 aaPredicted RBP16.88■□□□□ 0.29
PCDH1-203ENST00000394536 CYP1B1Q16678 543 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 SLC25A41Q8N5S1 370 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 ZNF862O60290 1169 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 NCKAP1LP55160 1127 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 STK32AQ8WU08 396 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 PIH1D1Q9NWS0 290 aaKnown RBP16.88■□□□□ 0.29
PCDH1-203ENST00000394536 ZNRF3Q9ULT6 936 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 RIPK3Q9Y572 518 aa16.88■□□□□ 0.29
PCDH1-203ENST00000394536 CLGNO14967 610 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 OATP04181 439 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 ABCD1P33897 745 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 RBBP5Q15291 538 aaKnown RBP16.87■□□□□ 0.29
PCDH1-203ENST00000394536 PCDH9Q9HC56 1237 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 AAASQ9NRG9 546 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 SLC17A7Q9P2U7 560 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 COL4A1P02462 1669 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 ITGB4P16144 1822 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 SDC4P31431 198 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 TNFSF9P41273 254 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 NRLP54845 237 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 RNF43Q68DV7 783 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 DPY19L2P1Q6NXN4 242 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 RGS9BPQ6ZS82 235 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 OR6B3Q8NGW1 331 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 ALKBH8Q96BT7 664 aaKnown RBP16.87■□□□□ 0.29
PCDH1-203ENST00000394536 MFSD14AQ96MC6 490 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 DCLRE1BQ9H816 532 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 FAM49BQ9NUQ9 324 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 ZFATQ9P243 1243 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 SLC24A2Q9UI40 661 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 APOBEC2Q9Y235 224 aaKnown RBP16.87■□□□□ 0.29
PCDH1-203ENST00000394536 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 SLC8A3P57103 927 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 KBTBD12Q3ZCT8 623 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 C1orf220Q5T0J3 134 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 FAM13CQ8NE31 585 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 GPRASP2Q96D09 838 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 DEFB129Q9H1M3 183 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 ANGPTL2Q9UKU9 493 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 SHOC2Q9UQ13 582 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
PCDH1-203ENST00000394536 KBTBD13C9JR72 458 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 WNT10BO00744 389 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 CST3P01034 146 aaPredicted RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 HIRAP54198 1017 aaPredicted RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 TAP1Q03518 808 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 PDK4Q16654 411 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 SNX30Q5VWJ9 437 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 PRPF39Q86UA1 669 aaKnown RBP16.86■□□□□ 0.29
PCDH1-203ENST00000394536 CGRRF1Q99675 332 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 CHKBQ9Y259 395 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 FIS1Q9Y3D6 152 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 STARD13Q9Y3M8 1113 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 CCDC78A2IDD5 438 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 AVILO75366 819 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 FDX1P10109 184 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 KCNA3P22001 575 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 GLRA2P23416 452 aa16.86■□□□□ 0.29
PCDH1-203ENST00000394536 MCL1Q07820 350 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms