RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 ATF7P17544 494 aaPredicted RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 CAPN2P17655 700 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 MSX1P28360 303 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 LRPAP1P30533 357 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 GNA15P30679 374 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 POLR2BP30876 1174 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 CD52P31358 61 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 CASQ1P31415 396 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 USP8P40818 1118 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 PNPLA4P41247 253 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 ARSDP51689 593 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 HADHBP55084 474 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 MYO1EQ12965 1108 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 BFSP2Q13515 415 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 TUBB2AQ13885 445 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 PKN2Q16513 984 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 IFI16Q16666 785 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 ZNF569Q5MCW4 686 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 ZNF618Q5T7W0 954 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 C9orf57Q5W0N0 161 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 SCARA3Q6AZY7 606 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 FBXO46Q6PJ61 603 aaPredicted RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 TMEM270Q6UE05 265 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 H2AFVQ71UI9 128 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 ANKRD33Q7Z3H0 272 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 CTU1Q7Z7A3 348 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 PALB2Q86YC2 1186 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 RPUSD2Q8IZ73 545 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 SLC35F6Q8N357 371 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 DNAJC5GQ8N7S2 189 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 RBBP8NLQ8NC74 664 aaPredicted RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 U2AF1L4Q8WU68 220 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 UBE2Q2Q8WVN8 375 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 RFFLQ8WZ73 363 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 MRRFQ96E11 262 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 HPDLQ96IR7 371 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 ZNF333Q96JL9 665 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 NOX5Q96PH1 765 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 DEFB118Q96PH6 123 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 PPP1R10Q96QC0 940 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 PCDHB18PQ96TA0 734 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 NAPGQ99747 312 aaPredicted RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 TUBB2BQ9BVA1 445 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 PACSIN1Q9BY11 444 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 IRX2Q9BZI1 471 aaPredicted RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 RNF208Q9H0X6 261 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 TRPV6Q9H1D0 765 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 UBN1Q9NPG3 1134 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 CISHQ9NSE2 258 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 SLC38A7Q9NVC3 462 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 TUBGCP4Q9UGJ1 667 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 GUCA1BQ9UMX6 200 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 TFR2Q9UP52 801 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 AGAP1Q9UPQ3 857 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 GIT1Q9Y2X7 761 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 R3HCC1Q9Y3T6 440 aaKnown RBP5.5□□□□□ -1.53
TRAV16-201ENST00000390444 HES2Q9Y543 173 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 PCDHB4Q9Y5E5 795 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 CAPN6Q9Y6Q1 641 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 CENPFP49454 3210 aa5.5□□□□□ -1.53
TRAV16-201ENST00000390444 GREB1Q4ZG55 1949 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 MACROD2A1Z1Q3 448 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 GRID2IPA4D2P6 1211 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 CTAGE9A4FU28 777 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 TLR3O15455 904 aaKnown RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 MGEA5O60502 916 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 CILPO75339 1184 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 MICAL2O94851 1124 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 CLSTN1O94985 981 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 MOCS3O95396 460 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 PARNO95453 639 aaKnown RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 LSM8O95777 96 aaKnown RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 RPLP1P05386 114 aaKnown RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 FAM163BP0C2L3 166 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 MYBL1P10243 752 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 HSPA8P11142 646 aaKnown RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 COL6A1P12109 1028 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 ITGA4P13612 1032 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 SELPP16109 830 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 PRLRP16471 622 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 PAX3P23760 479 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 VAMP1P23763 118 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 AKAP5P24588 427 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 CDH5P33151 784 aaPredicted RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 GTF2F1P35269 517 aaKnown RBP eCLIP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 IDH3AP50213 366 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 GUCY2FP51841 1108 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 GALCP54803 685 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 TNNC1P63316 161 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 NOMO3P69849 1222 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 AMPD2Q01433 879 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 SOX4Q06945 474 aaPredicted RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 NFX1Q12986 1120 aaKnown RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 GRIK3Q13003 919 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 MBTPS1Q14703 1052 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 CLEC16AQ2KHT3 1053 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 WDR72Q3MJ13 1102 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 SV2CQ496J9 727 aa5.49□□□□□ -1.53
TRAV16-201ENST00000390444 ARSJQ5FYB0 599 aaPredicted RBP5.49□□□□□ -1.53
TRAV16-201ENST00000390444 GLRA4Q5JXX5 417 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms