RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 C19orf81C9J6K1 198 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 EXTL3O43909 919 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 LMNAP02545 664 aaKnown RBP18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 PYGBP11216 843 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 MAPK4P31152 587 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 MCUR1Q96AQ8 359 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 APOBEC3GQ9HC16 384 aaKnown RBP18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 NFASCO94856 1347 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 UMODL1Q5DID0 1318 aa18.6■□□□□ 0.57
SQSTM1-202ENST00000389805 K7ERI5 159 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 GYG2O15488 501 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 C4BPAP04003 597 aaKnown RBP18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 UNGP13051 313 aaPredicted RBP18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 GTF2H1P32780 548 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 USP37Q86T82 979 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 VPS52Q8N1B4 723 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 FAM81AQ8TBF8 368 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 RBM15Q96T37 977 aaKnown RBP eCLIP18.59■□□□□ 0.574e-7■■□□□ 14.1
SQSTM1-202ENST00000389805 AFG3L2Q9Y4W6 797 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 MYPNQ86TC9 1320 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 MYH9P35579 1960 aaKnown RBP18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 PIK3CAP42336 1068 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 GCNT1Q02742 428 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 SLC34A1Q06495 639 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 STXBP2Q15833 593 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 ZACNQ401N2 412 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 IZUMO3Q5VZ72 239 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 APLFQ8IW19 511 aaPredicted RBP18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 MCOLN2Q8IZK6 566 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 C12orf50Q8NA57 414 aaPredicted RBP18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 PPFIBP2Q8ND30 876 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 OR5B17Q8NGF7 314 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 STMN2Q93045 179 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 CDHR1Q96JP9 859 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 SAYSD1Q9NPB0 183 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 HOXC10Q9NYD6 342 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 UVRAGQ9P2Y5 699 aa18.59■□□□□ 0.57
SQSTM1-202ENST00000389805 C2orf71A6NGG8 1288 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 DKC1O60832 514 aaKnown RBP eCLIP18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 PSMG1O95456 288 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 GAS8O95995 478 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 CPA2P48052 419 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 PDK4Q16654 411 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 LVRNQ6Q4G3 990 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 DENND1AQ8TEH3 1009 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 TRAPPC9Q96Q05 1148 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 SMC6Q96SB8 1091 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 FBXO6Q9NRD1 293 aaPredicted RBP18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 MROH7Q68CQ1 1323 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 PHIPQ8WWQ0 1821 aa18.58■□□□□ 0.57
SQSTM1-202ENST00000389805 MAGEA13PA6NCF6 341 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 MAGEB2O15479 319 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 GSC2O15499 205 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 OATP04181 439 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 GCAP28676 217 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 GJC1P36383 396 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 MAGEA4P43358 317 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 THOC5Q13769 683 aaKnown RBP18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 STAT4Q14765 748 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 FASTKD3Q14CZ7 662 aaKnown RBP18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 MAPK6Q16659 721 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 WDR44Q5JSH3 913 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 TMEM270Q6UE05 265 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 DEPTORQ8TB45 409 aa18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 ZNF668Q96K58 619 aaPredicted RBP18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 RBAKQ9NYW8 714 aaPredicted RBP18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 MAFBQ9Y5Q3 323 aaPredicted RBP18.58■□□□□ 0.56
SQSTM1-202ENST00000389805 FSCN2O14926 492 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 TCEA3O75764 348 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 CYP1A1P04798 512 aaPredicted RBP18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 RTP1P59025 263 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 MCL1Q07820 350 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 CTC1Q2NKJ3 1217 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 ZNF365Q70YC5 407 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 ZNF75CPQ92670 426 aaPredicted RBP18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 GATA6Q92908 595 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 NDNQ99608 321 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 PORCNQ9H237 461 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 HEY2Q9UBP5 337 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 DOCK1Q14185 1865 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 MAP3K7O43318 606 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 PTK6Q13882 451 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 PSMD6Q15008 389 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 PCYT2Q99447 389 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 C11orf70Q9BRQ4 267 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 BTBD10Q9BSF8 475 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 DHX33Q9H6R0 707 aaKnown RBP18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 VPS37BQ9H9H4 285 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 KRT82Q9NSB4 513 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 BTBD7Q9P203 1132 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 GOLGA8RI6L899 631 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 TRAFD1O14545 582 aaPredicted RBP18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 ATP2A1O14983 1001 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 GSTA2P09210 222 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 CETN2P41208 172 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 OCRLQ01968 901 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 RINLQ6ZS11 566 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 GSTA5Q7RTV2 222 aa18.57■□□□□ 0.56
SQSTM1-202ENST00000389805 PDCD7Q8N8D1 485 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms