RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 LHX1P48742 406 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 GPR15P49685 360 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 FOXK1P85037 733 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 ENPEPQ07075 957 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 SMARCB1Q12824 385 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 PLD1Q13393 1074 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 TRPC3Q13507 836 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 ZNF699Q32M78 642 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 FAM171BQ6P995 826 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 PARM1Q6UWI2 310 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 CCDC105Q8IYK2 499 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 DCP1BQ8IZD4 617 aaKnown RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 SHKBP1Q8TBC3 707 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 NKD2Q969F2 451 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 PSMG2Q969U7 264 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 SYT15Q9BQS2 421 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 MKNK1Q9BUB5 465 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 RPP25Q9BUL9 199 aaKnown RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 SDCBP2Q9H190 292 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 ASAH2Q9NR71 780 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 GTF3C4Q9UKN8 822 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 DUSP12Q9UNI6 340 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 R3HCC1Q9Y3T6 440 aaKnown RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 PCDHB5Q9Y5E4 795 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 ZFP37Q9Y6Q3 630 aaPredicted RBP12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 NCANO14594 1321 aa12.35□□□□□ -0.43
APOBEC3F-202ENST00000381565 PHACTR2O75167 634 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 MICAL2O94851 1124 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 MYL4P12829 197 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 FCARP24071 287 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 PCSK1P29120 753 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 ASPAP45381 313 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 ALDH1A3P47895 512 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 GCLMP48507 274 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 EPHB3P54753 998 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 TNNC1P63316 161 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 LRRC63Q05C16 580 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 TDGQ13569 410 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 CAMK4Q16566 473 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 MGAT5BQ3V5L5 792 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 CFAP221Q4G0U5 840 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 SPOPLQ6IQ16 392 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 TTI2Q6NXR4 508 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 SCARA5Q6ZMJ2 495 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 ELMOD1Q8N336 334 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 FLCNQ8NFG4 579 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 GPR152Q8TDT2 470 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 TAS1R2Q8TE23 839 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 MYLPFQ96A32 169 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 ZNF512Q96ME7 567 aaPredicted RBP12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 DUSP9Q99956 384 aaKnown RBP12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 PI4K2AQ9BTU6 479 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 GTPBP4Q9BZE4 634 aaKnown RBP12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 MFSD1Q9H3U5 465 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 ABCB6Q9NP58 842 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 CDH9Q9ULB4 789 aa12.34□□□□□ -0.43
APOBEC3F-202ENST00000381565 A0A1W2PRU2 124 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 PSMA7O14818 248 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 CETN3O15182 167 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 SLC16A3O15427 465 aaKnown RBP12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 PDGFRBP09619 1106 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 KRT13P13646 458 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 HMGA1P17096 107 aaKnown RBP12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 CYP2F1P24903 491 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 TUFMP49411 452 aaKnown RBP12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 CDH8P55286 799 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 DSG2Q14126 1118 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 ANGPT1Q15389 498 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 TEAD2Q15562 447 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 NFE2Q16621 373 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 ZNF667Q5HYK9 610 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 STXBP5Q5T5C0 1151 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 SDHAF4Q5VUM1 108 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 IQCEQ6IPM2 695 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 GAREM2Q75VX8 874 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 DNAJB7Q7Z6W7 309 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 TMEM150AQ86TG1 271 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 SLC44A3Q8N4M1 653 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 LEMD2Q8NC56 503 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 GIPC2Q8TF65 315 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 MCRS1Q96EZ8 462 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 PCED1BQ96HM7 432 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 DHTKD1Q96HY7 919 aaPredicted RBP12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 ZSWIM3Q96MP5 696 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 IPO9Q96P70 1041 aaKnown RBP12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 TSG101Q99816 390 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 KXD1Q9BQD3 176 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 APOBEC3GQ9HC16 384 aaKnown RBP12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 TMEM8AQ9HCN3 771 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 LMBRD1Q9NUN5 540 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 TMEM30AQ9NV96 361 aa12.33□□□□□ -0.44
APOBEC3F-202ENST00000381565 GDE1Q9NZC3 331 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms