RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 XYLBO75191 536 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 LRG1P02750 347 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 MTHFRP42898 656 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 ALDH1A3P47895 512 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 MFAP3P55082 362 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 TPM4P67936 248 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 CYP27A1Q02318 531 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 APBA1Q02410 837 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 PLD1Q13393 1074 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 ORC1Q13415 861 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 MGAT5BQ3V5L5 792 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 FKBP15Q5T1M5 1219 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 PAQR9Q6ZVX9 377 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 SLC4A11Q8NBS3 891 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 NECTIN4Q96NY8 510 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 CDH22Q9UJ99 828 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 FAM50BQ9Y247 325 aa19.94■□□□□ 0.78
SSU72-203ENST00000378725 EYSQ5T1H1 3165 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 GOLGA6L19H0YKK7 550 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 SOAT2O75908 522 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 BMP1P13497 986 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 TRIM21P19474 475 aaKnown RBP19.93■□□□□ 0.78
SSU72-203ENST00000378725 KCNQ1P51787 676 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 ZNF394Q53GI3 561 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 KLHDC7AQ5VTJ3 777 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 GJB7Q6PEY0 223 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 VSTM1Q6UX27 236 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.93■□□□□ 0.78
SSU72-203ENST00000378725 FUKQ8N0W3 1084 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 C12orf29Q8N999 325 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 SEPT5Q99719 369 aaPredicted RBP19.93■□□□□ 0.78
SSU72-203ENST00000378725 PIDD1Q9HB75 910 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 WDR6Q9NNW5 1121 aaKnown RBP19.93■□□□□ 0.78
SSU72-203ENST00000378725 PLCB1Q9NQ66 1216 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 RTN4Q9NQC3 1192 aaKnown RBP19.93■□□□□ 0.78
SSU72-203ENST00000378725 CEP72Q9P209 647 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 DNMT3BQ9UBC3 853 aaKnown RBP19.93■□□□□ 0.78
SSU72-203ENST00000378725 ASB3Q9Y575 518 aa19.93■□□□□ 0.78
SSU72-203ENST00000378725 RNF225M0QZC1 329 aaPredicted RBP19.92■□□□□ 0.78
SSU72-203ENST00000378725 CLDN5O00501 218 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 PTPN2P17706 415 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 ATF6P18850 670 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 BDNFP23560 247 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 EPHB3P54753 998 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 RPL10AP62906 217 aaKnown RBP19.92■□□□□ 0.78
SSU72-203ENST00000378725 UBXN1Q04323 297 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 CBX2Q14781 532 aaPredicted RBP19.92■□□□□ 0.78
SSU72-203ENST00000378725 CYFIP2Q96F07 1278 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 CEP295NLQ96MC4 621 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 ZNF512Q96ME7 567 aaPredicted RBP19.92■□□□□ 0.78
SSU72-203ENST00000378725 HEXIM2Q96MH2 286 aaKnown RBP19.92■□□□□ 0.78
SSU72-203ENST00000378725 ERGIC2Q96RQ1 377 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 HNRNPABQ99729 332 aaKnown RBP19.92■□□□□ 0.78
SSU72-203ENST00000378725 AVENQ9NQS1 362 aaPredicted RBP19.92■□□□□ 0.78
SSU72-203ENST00000378725 KIAA1257Q9ULG3 409 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 SIK3Q9Y2K2 1263 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 PCDHB4Q9Y5E5 795 aa19.92■□□□□ 0.78
SSU72-203ENST00000378725 COL6A3P12111 3177 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 A0A1B0GTH6 734 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 PAEPP09466 180 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 IL9P15248 144 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 ZNF132P52740 706 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 ARHGAP17Q68EM7 881 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 TMEM270Q6UE05 265 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 GRASPQ7Z6J2 395 aaPredicted RBP19.91■□□□□ 0.78
SSU72-203ENST00000378725 DNAJB7Q7Z6W7 309 aaPredicted RBP19.91■□□□□ 0.78
SSU72-203ENST00000378725 ELMOD1Q8N336 334 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 PSMG2Q969U7 264 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 C8orf48Q96LL4 319 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 NAP1L5Q96NT1 182 aaPredicted RBP19.91■□□□□ 0.78
SSU72-203ENST00000378725 LSM14BQ9BX40 385 aaKnown RBP19.91■□□□□ 0.78
SSU72-203ENST00000378725 NAA15Q9BXJ9 866 aaKnown RBP19.91■□□□□ 0.78
SSU72-203ENST00000378725 ZNF518BQ9C0D4 1074 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 POMKQ9H5K3 350 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 HCFC1R1Q9NWW0 138 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 DNAJC12Q9UKB3 198 aa19.91■□□□□ 0.78
SSU72-203ENST00000378725 NOL4O94818 638 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 CCDC130P13994 396 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 GPR15P49685 360 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 EPHA5P54756 1037 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 FANCCQ00597 558 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 NR1I3Q14994 352 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 DDR2Q16832 855 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 FILIP1LQ4L180 1135 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 IQCEQ6IPM2 695 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 ITIH5Q86UX2 942 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 FAM35AQ86V20 835 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 SLC2A14Q8TDB8 520 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 SHC3Q92529 594 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 SPATA17Q96L03 361 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 MED10Q9BTT4 135 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 LRRC3Q9BY71 257 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 CSNK1G1Q9HCP0 422 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 FAM49BQ9NUQ9 324 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 TMEM30AQ9NV96 361 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 AJAP1Q9UKB5 411 aaPredicted RBP19.9■□□□□ 0.78
SSU72-203ENST00000378725 ATP8B3O60423 1300 aa19.9■□□□□ 0.78
SSU72-203ENST00000378725 SPTBN5Q9NRC6 3674 aaKnown RBP19.89■□□□□ 0.78
SSU72-203ENST00000378725 TRIM66O15016 1216 aa19.89■□□□□ 0.77
SSU72-203ENST00000378725 TEX33O43247 280 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms