RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 TDP2O95551 362 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 PTENP60484 403 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 ITGA9Q13797 1035 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 NDFIP2Q9NV92 336 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 PRG3Q9Y2Y8 225 aaPredicted RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 TNPO2O14787 897 aaKnown RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 RAG1P15918 1043 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 GCLCP48506 637 aaPredicted RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 NFX1Q12986 1120 aaKnown RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 TBCELQ5QJ74 424 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 PDZK1Q5T2W1 519 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 TRIQKQ629K1 86 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 DENND1BQ6P3S1 775 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 DSTYKQ6XUX3 929 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 BNIPLQ7Z465 357 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 NLRP4Q96MN2 994 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 THUMPD3Q9BV44 507 aaKnown RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 SEMA4AQ9H3S1 761 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 ATXN2Q99700 1313 aaKnown RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 EIF3DO15371 548 aaKnown RBP eCLIP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 AP5Z1O43299 807 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 CDH3P22223 829 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 FOXP4Q8IVH2 680 aaPredicted RBP17.39■□□□□ 0.37
ATXN2-201ENST00000377617 OR6Y1Q8NGX8 325 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 ABHD8Q96I13 439 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 TUFT1Q9NNX1 390 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 BTG4Q9NY30 223 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 AK5Q9Y6K8 562 aa17.39■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L15C9J2P7 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L13C9JLJ4 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L11C9JVI0 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L18D6R9N7 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L22D6RA61 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L17D6RBQ6 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L19D6RCP7 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L20D6RJB6 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 HERVK_113P62684 666 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 LRRC74AQ0VAA2 488 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L24Q0WX57 530 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 C1DQ13901 141 aaKnown RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 SNX17Q15036 470 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 PDPK2PQ6A1A2 396 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 USP17L6PQ6QN14 398 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 TMEM237Q96Q45 408 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 PAFAH2Q99487 392 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 C2orf40Q9H1Z8 148 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 WDR70Q9NW82 654 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 PLEKP08567 350 aaPredicted RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 EIF2AK2P19525 551 aaKnown RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 C12orf60Q5U649 245 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 CPA5Q8WXQ8 436 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 EZH1Q92800 747 aaPredicted RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 AGAP3Q96P47 875 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 GALNT8Q9NY28 637 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 AGO2Q9UKV8 859 aaKnown RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 MTSS1O43312 755 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 TRIM13O60858 407 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 ME2P23368 584 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 GUCY1A2P33402 732 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 NUP62P37198 522 aaPredicted RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 MTMR1Q13613 665 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 EPHA7Q15375 998 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 ANO4Q32M45 955 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 ZNF568Q3ZCX4 644 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 NOP9Q86U38 636 aaKnown RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 DHRSXQ8N5I4 330 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 KCTD17Q8N5Z5 321 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 ASZ1Q8WWH4 475 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 OXNAD1Q96HP4 312 aaPredicted RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 SPRTNQ9H040 489 aaPredicted RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 SP110Q9HB58 689 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 MYMKA6NI61 221 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 TCP10L2B9ZVM9 353 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 RIPK2O43353 540 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 ALOX12P18054 663 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 JAK1P23458 1154 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 SOX11P35716 441 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 KLK7P49862 253 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 PSMC6P62333 389 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 BFSP2Q13515 415 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 NEDD8Q15843 81 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 RTL3Q8N8U3 475 aaKnown RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 BEST2Q8NFU1 509 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 TRPC4APQ8TEL6 797 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 EIF2AK1Q9BQI3 630 aaKnown RBP17.38■□□□□ 0.37
ATXN2-201ENST00000377617 MYLK2Q9H1R3 596 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 CLIC5Q9NZA1 410 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 TPRKBQ9Y3C4 175 aa17.38■□□□□ 0.37
ATXN2-201ENST00000377617 SYNDIG1LA6NDD5 238 aa17.37■□□□□ 0.37
ATXN2-201ENST00000377617 TNFRSF21O75509 655 aa17.37■□□□□ 0.37
ATXN2-201ENST00000377617 CDC25CP30307 473 aa17.37■□□□□ 0.37
ATXN2-201ENST00000377617 TRAF3Q13114 568 aa17.37■□□□□ 0.37
ATXN2-201ENST00000377617 KCNT1Q5JUK3 1230 aa17.37■□□□□ 0.37
ATXN2-201ENST00000377617 CWF19L1Q69YN2 538 aaKnown RBP17.37■□□□□ 0.37
ATXN2-201ENST00000377617 IKBIPQ70UQ0 350 aa17.37■□□□□ 0.37
ATXN2-201ENST00000377617 NIM1KQ8IY84 436 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms