RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 CTSHP09668 335 aa19.5■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CETPP11597 493 aa19.5■□□□□ 0.71
CNTNAP3B-203ENST00000377561 AARSP49588 968 aaKnown RBP eCLIP19.5■□□□□ 0.71
CNTNAP3B-203ENST00000377561 COL9A3Q14050 684 aaPredicted RBP19.5■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DNAAF5Q86Y56 855 aa19.5■□□□□ 0.71
CNTNAP3B-203ENST00000377561 KIRREL3Q8IZU9 778 aa19.5■□□□□ 0.71
CNTNAP3B-203ENST00000377561 E2F7Q96AV8 911 aa19.5■□□□□ 0.71
CNTNAP3B-203ENST00000377561 INTS13Q9NVM9 706 aa19.5■□□□□ 0.71
CNTNAP3B-203ENST00000377561 TSPAN17Q96FV3 270 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 KLHL2O95198 593 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CCND1P24385 295 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 RHBDL3P58872 404 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 RARS2Q5T160 578 aaKnown RBP19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SPIRE2Q8WWL2 714 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SLC40A1Q9NP59 571 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SYNPO2Q9UMS6 1093 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SNX5Q9Y5X3 404 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 RNF103-CHMP3A0A140T963 221 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DNAJC3Q13217 504 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 MDH1BQ5I0G3 518 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 RABGAP1LQ5R372 815 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CAPRIN2Q6IMN6 1127 aaKnown RBP19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DDIASQ8IXT1 998 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 MTBPQ96DY7 904 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 VPS33BQ9H267 617 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SLIT3O75094 1523 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DDX3XO00571 662 aaKnown RBP eCLIP19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 ITIH4Q14624 930 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DACT2Q5SW24 774 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 STAMBPL1Q96FJ0 436 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SPON1Q9HCB6 807 aa19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 AFF4Q9UHB7 1163 aaKnown RBP19.49■□□□□ 0.71
CNTNAP3B-203ENST00000377561 EML1O00423 815 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CXCL9Q07325 125 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 PDK2Q15119 407 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 C20orf96Q9NUD7 363 aaPredicted RBP19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 TRIM49D1C9J1S8 452 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CLCN3P51790 818 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SPOCD1Q6ZMY3 1216 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CREG2Q8IUH2 290 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 ABRAQ8N0Z2 381 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 TFB1MQ8WVM0 346 aaKnown RBP19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 MKL1Q969V6 931 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CHCHD3Q9NX63 227 aaKnown RBP19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CCL15-CCL14A0A0B4J2E2 113 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 FDFT1P37268 417 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SLC26A2P50443 739 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CCL15Q16663 113 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SLC30A10Q6XR72 485 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DNERQ8NFT8 737 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 TASP1Q9H6P5 420 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CISHQ9NSE2 258 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 ARHGEF38Q9NXL2 777 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 ZNF197O14709 1029 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 C3P01024 1663 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 VEGFAP15692 232 aaPredicted RBP19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 KCNMB3Q9NPA1 279 aa19.48■□□□□ 0.71
CNTNAP3B-203ENST00000377561 FAM95CA0A1B0GW59 222 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 FAM200BP0CF97 657 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 MYL2P10916 166 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 OTUD4Q01804 1114 aaKnown RBP19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 C1QBPQ07021 282 aaKnown RBP19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 ARHGEF19Q8IW93 802 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 MCOLN2Q8IZK6 566 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 KIF2BQ8N4N8 673 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 TATDN2Q93075 761 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CASS4Q9NQ75 786 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 SYNDIG1LA6NDD5 238 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DNAJC6O75061 913 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 ARMC2Q8NEN0 867 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CATSPERBQ9H7T0 1116 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 OCA2Q04671 838 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 LAMB3Q13751 1172 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 KCNT1Q5JUK3 1230 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 THEMIS2Q5TEJ8 643 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 LRRC6Q86X45 466 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 AENQ8WTP8 325 aaKnown RBP19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 MAGEB18Q96M61 343 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 NEUROG2Q9H2A3 272 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 IGF2BP3O00425 579 aaKnown RBP eCLIP19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 MYL6P60660 151 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 GCNT1Q02742 428 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 NR1H4Q96RI1 486 aaPredicted RBP19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 COG4Q9H9E3 785 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DYRK4Q9NR20 520 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 KIF17Q9P2E2 1029 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 GFAPP14136 432 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 R3HDM1Q15032 1099 aaKnown RBP19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 IL17AQ16552 155 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 ZC3H12BQ5HYM0 836 aaKnown RBP19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 MROH9Q5TGP6 573 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 NT5DC3Q86UY8 548 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 FBXO36Q8NEA4 188 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 CATSPER1Q8NEC5 780 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 HDAC7Q8WUI4 952 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 PBXIP1Q96AQ6 731 aa19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 DDX50Q9BQ39 737 aaKnown RBP19.47■□□□□ 0.71
CNTNAP3B-203ENST00000377561 PTGER2P43116 358 aa19.46■□□□□ 0.71
CNTNAP3B-203ENST00000377561 ELMO2Q96JJ3 720 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms