RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 CEP72Q9P209 647 aa12.09□□□□□ -0.47
HSPG2-202ENST00000374676 RNF225M0QZC1 329 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-202ENST00000374676 PRRG1O14668 218 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 VDRP11473 427 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 CYP2F1P24903 491 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 PBX1P40424 430 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 KLK7P49862 253 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 ITIH3Q06033 890 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 PLD1Q13393 1074 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 ORC1Q13415 861 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 ARHGAP44Q17R89 818 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 CCDC142Q17RM4 750 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 ZNF394Q53GI3 561 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 ARHGAP17Q68EM7 881 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 EP400NLQ6ZTU2 488 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 PAQR9Q6ZVX9 377 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 GPR149Q86SP6 731 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 FUKQ8N0W3 1084 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 C12orf29Q8N999 325 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 NEK11Q8NG66 645 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 CYFIP2Q96F07 1278 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 CEP295NLQ96MC4 621 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 HEXIM2Q96MH2 286 aaKnown RBP12.08□□□□□ -0.48
HSPG2-202ENST00000374676 HNRNPABQ99729 332 aaKnown RBP12.08□□□□□ -0.48
HSPG2-202ENST00000374676 ADAM7Q9H2U9 754 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 ABI2Q9NYB9 513 aaPredicted RBP12.08□□□□□ -0.48
HSPG2-202ENST00000374676 IFNKQ9P0W0 207 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 CD207Q9UJ71 328 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 SLC27A5Q9Y2P5 690 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 INSL5Q9Y5Q6 135 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 FHOD1Q9Y613 1164 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 C2orf16Q68DN1 1984 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 PRUNE2Q8WUY3 3088 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 ATP8B3O60423 1300 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
HSPG2-202ENST00000374676 GREB1Q4ZG55 1949 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 CCDC195A0A1B0GUA6 201 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 FOXN3O00409 490 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 CBFA2T2O43439 604 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 XYLBO75191 536 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 RFPL2O75678 378 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 LRG1P02750 347 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 TPM3P06753 285 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 KCNA5P22460 613 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 ALDH1A3P47895 512 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 RPL10AP62906 217 aaKnown RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 CYP27A1Q02318 531 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 DRAP1Q14919 205 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 LEXMQ3ZCV2 418 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 CES5AQ6NT32 575 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 SARM1Q6SZW1 724 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 FAM71AQ8IYT1 594 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 C12orf76Q8N812 135 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 RBBP8NLQ8NC74 664 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 SLC2A14Q8TDB8 520 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 ZNF707Q96C28 371 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 PCMTD1Q96MG8 357 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 EDEM3Q9BZQ6 932 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 XPO4Q9C0E2 1151 aaKnown RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 FAM207AQ9NSI2 230 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 AJAP1Q9UKB5 411 aaPredicted RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 YIPF1Q9Y548 306 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 ASB3Q9Y575 518 aa12.07□□□□□ -0.48
HSPG2-202ENST00000374676 ZNF638Q14966 1978 aaKnown RBP12.07□□□□□ -0.48
HSPG2-202ENST00000374676 COL6A3P12111 3177 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 H3BQ06 376 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-202ENST00000374676 EPHB6O15197 1021 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 BDNFP23560 247 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 EPHB3P54753 998 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 JAM2P57087 298 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 BPIFB4P59827 614 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 POLR2FP61218 127 aaKnown RBP12.06□□□□□ -0.48
HSPG2-202ENST00000374676 TWF1Q12792 350 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 STILQ15468 1287 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 CNGA2Q16280 664 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 PUS10Q3MIT2 529 aaKnown RBP12.06□□□□□ -0.48
HSPG2-202ENST00000374676 MGAT5BQ3V5L5 792 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 SGO2Q562F6 1265 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 FIGNQ5HY92 759 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 ATAT1Q5SQI0 421 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 RARS2Q5T160 578 aaKnown RBP12.06□□□□□ -0.48
HSPG2-202ENST00000374676 PPP1R26Q5T8A7 1209 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-202ENST00000374676 TMC5Q6UXY8 1006 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 FAM35AQ86V20 835 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 TTC9BQ8N6N2 239 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 SMRP1Q8NCR6 262 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 SUSD6Q92537 303 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 SMG7Q92540 1137 aaKnown RBP12.06□□□□□ -0.48
HSPG2-202ENST00000374676 SMARCD1Q96GM5 515 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 SPATA17Q96L03 361 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 C8orf48Q96LL4 319 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 ZNF512Q96ME7 567 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-202ENST00000374676 SEPT5Q99719 369 aaPredicted RBP12.06□□□□□ -0.48
HSPG2-202ENST00000374676 MED10Q9BTT4 135 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 ZNF518BQ9C0D4 1074 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 GPR88Q9GZN0 384 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 PRDM6Q9NQX0 595 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 FAM49BQ9NUQ9 324 aa12.06□□□□□ -0.48
HSPG2-202ENST00000374676 CLDN5O00501 218 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms