RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ARHGAP44Q17R89 818 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 TTC9BQ8N6N2 239 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 RHOBTB2Q9BYZ6 727 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 FAM207AQ9NSI2 230 aaPredicted RBP15.97■□□□□ 0.15
HSPG2-201ENST00000374673 IFNKQ9P0W0 207 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 SLC27A5Q9Y2P5 690 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 YIPF1Q9Y548 306 aa15.97■□□□□ 0.15
HSPG2-201ENST00000374673 PATJQ8NI35 1801 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 RFPL2O75678 378 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 KCNA5P22460 613 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 PBX1P40424 430 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 ITIH3Q06033 890 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 PLD1Q13393 1074 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 MGAT5BQ3V5L5 792 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 VSTM1Q6UX27 236 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 CYP26C1Q6V0L0 522 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 FUKQ8N0W3 1084 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 C12orf29Q8N999 325 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 RBBP8NLQ8NC74 664 aaPredicted RBP15.96■□□□□ 0.15
HSPG2-201ENST00000374673 SMRP1Q8NCR6 262 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 NEK11Q8NG66 645 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 PCMTD1Q96MG8 357 aaPredicted RBP15.96■□□□□ 0.15
HSPG2-201ENST00000374673 HNRNPABQ99729 332 aaKnown RBP15.96■□□□□ 0.15
HSPG2-201ENST00000374673 B3GNT5Q9BYG0 378 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 PRKD2Q9BZL6 878 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 GPR88Q9GZN0 384 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 S1PR5Q9H228 398 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 CEP72Q9P209 647 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 CD207Q9UJ71 328 aa15.96■□□□□ 0.15
HSPG2-201ENST00000374673 GREB1Q4ZG55 1949 aa15.96■□□□□ 0.14
HSPG2-201ENST00000374673 ATP8B3O60423 1300 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 DENND4AQ7Z401 1863 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 CCDC195A0A1B0GUA6 201 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 RNF225M0QZC1 329 aaPredicted RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 EPHB6O15197 1021 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 CBFA2T2O43439 604 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 LRG1P02750 347 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 VDRP11473 427 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 CCDC130P13994 396 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 BDNFP23560 247 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 CYP2F1P24903 491 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 POLR2FP61218 127 aaKnown RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 TWF1Q12792 350 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 RAPGEF1Q13905 1077 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 DRAP1Q14919 205 aaPredicted RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 RARS2Q5T160 578 aaKnown RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 ARHGAP17Q68EM7 881 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 SARM1Q6SZW1 724 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 PAQR9Q6ZVX9 377 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 FAM35AQ86V20 835 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 C12orf76Q8N812 135 aaPredicted RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 SLC2A14Q8TDB8 520 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 ZNF707Q96C28 371 aaPredicted RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 CYFIP2Q96F07 1278 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 HEXIM2Q96MH2 286 aaKnown RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 SEPT5Q99719 369 aaPredicted RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 STK33Q9BYT3 514 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 ZNF518BQ9C0D4 1074 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 XPO4Q9C0E2 1151 aaKnown RBP15.95■□□□□ 0.14
HSPG2-201ENST00000374673 ADAM7Q9H2U9 754 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 FAM49BQ9NUQ9 324 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 KIAA1257Q9ULG3 409 aa15.95■□□□□ 0.14
HSPG2-201ENST00000374673 H3BQ06 376 aaPredicted RBP15.94■□□□□ 0.14
HSPG2-201ENST00000374673 CLDN5O00501 218 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 SOAT2O75908 522 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 TPM3P06753 285 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 KRT5P13647 590 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 ATF6P18850 670 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 ALDH1A3P47895 512 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 CDR1P51861 262 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 RPL10AP62906 217 aaKnown RBP15.94■□□□□ 0.14
HSPG2-201ENST00000374673 LEXMQ3ZCV2 418 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 SGO2Q562F6 1265 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 PPP1R26Q5T8A7 1209 aaPredicted RBP15.94■□□□□ 0.14
HSPG2-201ENST00000374673 TMC5Q6UXY8 1006 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 GPR149Q86SP6 731 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 SMARCD1Q96GM5 515 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 CEP295NLQ96MC4 621 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 MED10Q9BTT4 135 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 PRDM6Q9NQX0 595 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 THEGQ9P2T0 379 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 REV3LO60673 3130 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 BRWD1Q9NSI6 2320 aa15.94■□□□□ 0.14
HSPG2-201ENST00000374673 F8VZ95 297 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 FOXN3O00409 490 aaPredicted RBP15.93■□□□□ 0.14
HSPG2-201ENST00000374673 TRIM66O15016 1216 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 CCL16O15467 120 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 XYLBO75191 536 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 CD19P15391 556 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 EPHB3P54753 998 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 JAM2P57087 298 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 SMAD4Q13485 552 aaKnown RBP15.93■□□□□ 0.14
HSPG2-201ENST00000374673 PTPN21Q16825 1174 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 FIGNQ5HY92 759 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 CES5AQ6NT32 575 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 FAM71AQ8IYT1 594 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 FEZF2Q8TBJ5 459 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 SMG7Q92540 1137 aaKnown RBP15.93■□□□□ 0.14
HSPG2-201ENST00000374673 C8orf48Q96LL4 319 aa15.93■□□□□ 0.14
HSPG2-201ENST00000374673 APOL5Q9BWW9 433 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms