RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 ZBTB24O43167 697 aaPredicted RBP17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 TPST1O60507 370 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 ENTPD3O75355 529 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 ALBP02768 609 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 SLC34A1Q06495 639 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 DMC1Q14565 340 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 GPR141Q7Z602 305 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 NT5DC3Q86UY8 548 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 NMD3Q96D46 503 aaKnown RBP17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 WNK4Q96J92 1243 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
PTP4A1-201ENST00000370651 RFC5P40937 340 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 CCDC85BQ15834 202 aaPredicted RBP17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 PCNX4Q63HM2 1172 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 BNC2Q6ZN30 1099 aaPredicted RBP17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 NOP9Q86U38 636 aaKnown RBP17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 CALML6Q8TD86 181 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 SCFD2Q8WU76 684 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 PCDHGB4Q9UN71 923 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 CAMSAP1Q5T5Y3 1602 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 IL18RAPO95256 599 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 MYL3P08590 195 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 SERPINB5P36952 375 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 PSMD7P51665 324 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 KBTBD12Q3ZCT8 623 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 CD302Q8IX05 232 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 ZC3H11AO75152 810 aaKnown RBP eCLIP17.81■□□□□ 0.445e-8■□□□□ 9.8
PTP4A1-201ENST00000370651 HLA-DPA1P20036 260 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 AFG1LQ8WV93 481 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 SLC8A2Q9UPR5 921 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 TNFRSF8P28908 595 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 KCNT1Q5JUK3 1230 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 SPDYCQ5MJ68 293 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 SLC47A2Q86VL8 602 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 TMPRSS6Q8IU80 811 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 SEPT1Q8WYJ6 367 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 SLC5A5Q92911 643 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 TATDN2Q93075 761 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 TMEM237Q96Q45 408 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 ZNF212Q9UDV6 495 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 RPS6KL1Q9Y6S9 549 aa17.81■□□□□ 0.44
PTP4A1-201ENST00000370651 SRRM3A6NNA2 597 aaPredicted RBP17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 CCDC159P0C7I6 412 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 SERPINB1P30740 379 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 FDFT1P37268 417 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 SPOCD1Q6ZMY3 1216 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 ZNF720Q7Z2F6 126 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 BTBD10Q9BSF8 475 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 TEX13BQ9BXU2 312 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 PCDHGC5Q9Y5F6 944 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 KCNK10P57789 538 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 TRIM16LQ309B1 348 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 STRIP1Q5VSL9 837 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 APPL2Q8NEU8 664 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 STK32AQ8WU08 396 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 AFF4Q9UHB7 1163 aaKnown RBP17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 PDGFRBP09619 1106 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 MUTP22033 750 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 EPHB2P29323 1055 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 PREPLQ4J6C6 727 aaPredicted RBP17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 KCNV1Q6PIU1 500 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 CCNJLQ8IV13 435 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 WDR70Q9NW82 654 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 MTSS1O43312 755 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 CLK1P49759 484 aaKnown RBP17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 NAPEPLDQ6IQ20 393 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 IYDQ6PHW0 289 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 TMCO5AQ8N6Q1 288 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 SHCBP1Q8NEM2 672 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 SGF29Q96ES7 293 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 CRAMP1Q96RY5 1269 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 C10orf88Q9H8K7 445 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 GGA2Q9UJY4 613 aa17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 CEP170BQ9Y4F5 1589 aaPredicted RBP17.8■□□□□ 0.44
PTP4A1-201ENST00000370651 DDX3XO00571 662 aaKnown RBP eCLIP17.79■□□□□ 0.442e-19■■■□□ 18.9
PTP4A1-201ENST00000370651 MAFGO15525 162 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 ZSCAN9O15535 394 aaPredicted RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 BMP6P22004 513 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 HMGCS2P54868 508 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 MTMR2Q13614 643 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 ANO4Q32M45 955 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 ATF7IP2Q5U623 682 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 TFB1MQ8WVM0 346 aaKnown RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 HNRNPRO43390 633 aaKnown RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 NUP107P57740 925 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 PPP2R3CQ969Q6 453 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 DCLK3Q9C098 648 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 SHOC2Q9UQ13 582 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 FGFR2P21802 821 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 ACADSBP45954 432 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 SEPT12Q8IYM1 358 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 TAS1R2Q8TE23 839 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 SNX13Q9Y5W8 968 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 COL3A1P02461 1466 aaPredicted RBP17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 PYGMP11217 842 aa17.79■□□□□ 0.44
PTP4A1-201ENST00000370651 GRK2P25098 689 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms