RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 DRG1Q9Y295 367 aaKnown RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 ATXN2Q99700 1313 aaKnown RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 NDUFAB1O14561 156 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 RGS16O15492 202 aaPredicted RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 VTNP04004 478 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 HSPA8P11142 646 aaKnown RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 HPDP32754 393 aaPredicted RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 ADCY8P40145 1251 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 GABRB2P47870 512 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 CNGA2Q16280 664 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 SLC10A6Q3KNW5 377 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 MFSD5Q6N075 450 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 LLGL2Q6P1M3 1020 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 MICALCLQ6ZW33 695 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 TAOK1Q7L7X3 1001 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 WDTC1Q8N5D0 677 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 CENPTQ96BT3 561 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 GCOM2Q9BZD3 368 aaPredicted RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 AP5M1Q9H0R1 490 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 EPB41L4BQ9H329 900 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 SLC12A6Q9UHW9 1150 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 ANAPC5Q9UJX4 755 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 POLIQ9UNA4 740 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 NOVA2Q9UNW9 492 aaKnown RBP14.78□□□□□ -0.04
USF1-202ENST00000368020 PTCH2Q9Y6C5 1203 aa14.78□□□□□ -0.04
USF1-202ENST00000368020 NRCAMQ92823 1304 aa14.77□□□□□ -0.04
USF1-202ENST00000368020 DYNC1LI2O43237 492 aaPredicted RBP14.77□□□□□ -0.05
USF1-202ENST00000368020 DESP17661 470 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 PSMA2P25787 234 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 CTCFP49711 727 aaPredicted RBP14.77□□□□□ -0.05
USF1-202ENST00000368020 CPT1AP50416 773 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 MAGOHP61326 146 aaKnown RBP14.77□□□□□ -0.05
USF1-202ENST00000368020 TRIM32Q13049 653 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 PTGISQ16647 500 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 SPOCD1Q6ZMY3 1216 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 GSTA5Q7RTV2 222 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 SLC4A11Q8NBS3 891 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 CXorf38Q8TB03 319 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 ATG4AQ8WYN0 398 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 NCAPGQ9BPX3 1015 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 UPF3AQ9H1J1 476 aaKnown RBP14.77□□□□□ -0.05
USF1-202ENST00000368020 SEMA4AQ9H3S1 761 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 DPP3Q9NY33 737 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 RSPH14Q9UHP6 348 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.77□□□□□ -0.05
USF1-202ENST00000368020 NEU2Q9Y3R4 380 aa14.77□□□□□ -0.05
USF1-202ENST00000368020 RASGRF2O14827 1237 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 LIASO43766 372 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 RARBP10826 455 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 IVDP26440 423 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 AXLP30530 894 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 SSTR3P32745 418 aaPredicted RBP14.76□□□□□ -0.05
USF1-202ENST00000368020 GJC1P36383 396 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 YARSP54577 528 aaKnown RBP14.76□□□□□ -0.05
USF1-202ENST00000368020 GJA9P57773 515 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 PSMC1P62191 440 aaKnown RBP14.76□□□□□ -0.05
USF1-202ENST00000368020 ZNF252P-AS1Q0IIN9 211 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 PTPN20Q4JDL3 420 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 DENND1BQ6P3S1 775 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 TMEM192Q8IY95 271 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 KIAA0319LQ8IZA0 1049 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 RNF25Q96BH1 459 aaPredicted RBP14.76□□□□□ -0.05
USF1-202ENST00000368020 CPB2Q96IY4 423 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 ZNF668Q96K58 619 aaPredicted RBP14.76□□□□□ -0.05
USF1-202ENST00000368020 SERPINB12Q96P63 405 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 HEMGNQ9BXL5 484 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 GGA2Q9UJY4 613 aa14.76□□□□□ -0.05
USF1-202ENST00000368020 PDCD11Q14690 1871 aaKnown RBP14.76□□□□□ -0.05
USF1-202ENST00000368020 hCG_1818297A0A087WSY0 165 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 SMIM35A0A1B0GVV1 85 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 KPNA6O60684 536 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 RNF8O76064 485 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 INHAP05111 366 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 ITGAVP06756 1048 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 ATF7P17544 494 aaPredicted RBP14.75□□□□□ -0.05
USF1-202ENST00000368020 ITGA8P53708 1063 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 GUCY1A3Q02108 690 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 PKN2Q16513 984 aaKnown RBP14.75□□□□□ -0.05
USF1-202ENST00000368020 NOTUMQ6P988 496 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 SLC27A1Q6PCB7 646 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 CTU1Q7Z7A3 348 aaKnown RBP14.75□□□□□ -0.05
USF1-202ENST00000368020 CCDC25Q86WR0 208 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 CDR2LQ86X02 465 aaPredicted RBP14.75□□□□□ -0.05
USF1-202ENST00000368020 NKD2Q969F2 451 aaPredicted RBP14.75□□□□□ -0.05
USF1-202ENST00000368020 MCRS1Q96EZ8 462 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 CCDC77Q9BR77 488 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 NT5C1AQ9BXI3 368 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 SMYD3Q9H7B4 428 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 SPC25Q9HBM1 224 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 ASNSD1Q9NWL6 643 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 AGAP1Q9UPQ3 857 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 LRRD1A4D1F6 860 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 F8VP50 259 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 SMAPO00193 183 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 TCEA3O75764 348 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 MICAL2O94851 1124 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 TTC4O95801 387 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 FAM107AO95990 144 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
USF1-202ENST00000368020 FGFR4P22455 802 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms