RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 ARHGAP20Q9P2F6 1191 aa17.23■□□□□ 0.35
SCAF8-201ENST00000367178 TRAF3IP3Q9Y228 551 aa17.23■□□□□ 0.35
SCAF8-201ENST00000367178 ETFBP38117 255 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 TEDDM1Q5T9Z0 273 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 TFB1MQ8WVM0 346 aaKnown RBP17.22■□□□□ 0.35
SCAF8-201ENST00000367178 ARL8AQ96BM9 186 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 KLF6Q99612 283 aaPredicted RBP17.22■□□□□ 0.35
SCAF8-201ENST00000367178 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 FAM198AQ9UFP1 575 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.22■□□□□ 0.35
SCAF8-201ENST00000367178 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 KCNT1Q5JUK3 1230 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 ATP6V0D2Q8N8Y2 350 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 NSMCE4AQ9NXX6 385 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 KRT4P19013 534 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 PTPN11Q06124 597 aaPredicted RBP17.22■□□□□ 0.35
SCAF8-201ENST00000367178 SLC29A2Q14542 456 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 MFN1Q8IWA4 741 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 SPIRE2Q8WWL2 714 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 XAB2Q9HCS7 855 aaKnown RBP17.22■□□□□ 0.35
SCAF8-201ENST00000367178 F9P00740 461 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 CNTN2Q02246 1040 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 ARHGEF7Q14155 803 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 AP1ARQ63HQ0 302 aa17.22■□□□□ 0.35
SCAF8-201ENST00000367178 RPRD1AQ96P16 312 aaPredicted RBP17.22■□□□□ 0.35
SCAF8-201ENST00000367178 ILDR1Q86SU0 546 aaPredicted RBP17.21■□□□□ 0.35
SCAF8-201ENST00000367178 SLC47A2Q86VL8 602 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 SLC20A1Q8WUM9 679 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 ATG4AQ8WYN0 398 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 DACT3Q96B18 629 aaPredicted RBP17.21■□□□□ 0.35
SCAF8-201ENST00000367178 MRIQ9BWK5 157 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 A1CFQ9NQ94 594 aaKnown RBP17.21■□□□□ 0.35
SCAF8-201ENST00000367178 AAASQ9NRG9 546 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.21■□□□□ 0.35
SCAF8-201ENST00000367178 SYNPO2Q9UMS6 1093 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 KPNA6O60684 536 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 HMOX2P30519 316 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 ATICP31939 592 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 BFSP2Q13515 415 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 TRADDQ15628 312 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 RGS9BPQ6ZS82 235 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 MIB1Q86YT6 1006 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 REPS2Q8NFH8 660 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 EPN3Q9H201 632 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 RAP1GAPP47736 663 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 PPATQ06203 517 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 GRIK4Q16099 956 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 FAXCQ5TGI0 409 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 STAMBPL1Q96FJ0 436 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 TMEM176AQ96HP8 235 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 CENPKQ9BS16 269 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 PCDHGB4Q9UN71 923 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 ADGRB2O60241 1585 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 RNF103-CHMP3A0A140T963 221 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 AARSP49588 968 aaKnown RBP eCLIP17.21■□□□□ 0.35
SCAF8-201ENST00000367178 SARSP49591 514 aaKnown RBP17.21■□□□□ 0.35
SCAF8-201ENST00000367178 CTCFP49711 727 aaPredicted RBP17.21■□□□□ 0.35
SCAF8-201ENST00000367178 CUL3Q13618 768 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 XPO6Q96QU8 1125 aaKnown RBP17.21■□□□□ 0.35
SCAF8-201ENST00000367178 ABHD16BQ9H3Z7 469 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 ANLNQ9NQW6 1124 aa17.21■□□□□ 0.35
SCAF8-201ENST00000367178 TMEM120BA0PK00 339 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 EML1O00423 815 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 HOXA2O43364 376 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 LSM8O95777 96 aaKnown RBP17.2■□□□□ 0.34
SCAF8-201ENST00000367178 MAP4P27816 1152 aaKnown RBP17.2■□□□□ 0.34
SCAF8-201ENST00000367178 FAM172AQ8WUF8 416 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 CCT8L2Q96SF2 557 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 FAM129AQ9BZQ8 928 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 RANBP17Q9H2T7 1088 aaKnown RBP17.2■□□□□ 0.34
SCAF8-201ENST00000367178 VTA1Q9NP79 307 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 OSGEPQ9NPF4 335 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 MARCOQ9UEW3 520 aaPredicted RBP17.2■□□□□ 0.34
SCAF8-201ENST00000367178 FRMPD4Q14CM0 1322 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 SLC11A2P49281 568 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 GTF2H3Q13889 308 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 SYTL3Q4VX76 610 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 TRIML2Q8N7C3 387 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 MKL1Q969V6 931 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 NRBF2Q96F24 287 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 TRIM4Q9C037 500 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 BLOC1S4Q9NUP1 217 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 TMEM150BA6NC51 233 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 CFAP73A6NFT4 308 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 PMPCBO75439 489 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 ANXA9O76027 345 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 MAP3K6O95382 1288 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 SYF2O95926 243 aaKnown RBP17.2■□□□□ 0.34
SCAF8-201ENST00000367178 LRG1P02750 347 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 PYGLP06737 847 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 STMN1P16949 149 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 PTPRAP18433 802 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 TFDP3Q5H9I0 405 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 FBXO47Q5MNV8 452 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 KIRREL3Q8IZU9 778 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 RIBC1Q8N443 379 aaPredicted RBP17.2■□□□□ 0.34
SCAF8-201ENST00000367178 SLC26A7Q8TE54 656 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 PPP1R36Q96LQ0 422 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 GPR63Q9BZJ6 419 aa17.2■□□□□ 0.34
SCAF8-201ENST00000367178 PRLRP16471 622 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms