RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 ATG4CQ96DT6 458 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 CLPTM1LQ96KA5 538 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 BTBD10Q9BSF8 475 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 ZNF302Q9NR11 478 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 AVILO75366 819 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 P4HA1P13674 534 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 VCPP55072 806 aaKnown RBP14.28□□□□□ -0.12
SGMS1-202ENST00000361781 CDH8P55286 799 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 SPIRE1Q08AE8 756 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 ART3Q13508 389 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 EMC2Q15006 297 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 ZCCHC9Q8N567 271 aaKnown RBP14.28□□□□□ -0.12
SGMS1-202ENST00000361781 NSUN6Q8TEA1 469 aaKnown RBP14.28□□□□□ -0.12
SGMS1-202ENST00000361781 PYDC1Q8WXC3 89 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 CEP41Q9BYV8 373 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 RPF1Q9H9Y2 349 aaKnown RBP14.28□□□□□ -0.12
SGMS1-202ENST00000361781 ARL8BQ9NVJ2 186 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 DDX56Q9NY93 547 aaKnown RBP14.28□□□□□ -0.12
SGMS1-202ENST00000361781 AKAP11Q9UKA4 1901 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 SLC26A4O43511 780 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 SNRPAP09012 282 aaKnown RBP14.28□□□□□ -0.12
SGMS1-202ENST00000361781 OSBPP22059 807 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 HMGCS2P54868 508 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 MORF4L2Q15014 288 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 KHDC1Q4VXA5 237 aaKnown RBP14.28□□□□□ -0.12
SGMS1-202ENST00000361781 SPDYCQ5MJ68 293 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 OLFML2BQ68BL8 750 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 RFWD3Q6PCD5 774 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 LENG9Q96B70 501 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 NUF2Q9BZD4 464 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 SLC38A10Q9HBR0 1119 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 KCNG1Q9UIX4 513 aa14.28□□□□□ -0.12
SGMS1-202ENST00000361781 PIGHQ14442 188 aaPredicted RBP14.27□□□□□ -0.12
SGMS1-202ENST00000361781 C16orf46Q6P387 395 aa14.27□□□□□ -0.12
SGMS1-202ENST00000361781 DSTYKQ6XUX3 929 aa14.27□□□□□ -0.12
SGMS1-202ENST00000361781 TTC7BQ86TV6 843 aa14.27□□□□□ -0.12
SGMS1-202ENST00000361781 SCUBE1Q8IWY4 988 aa14.27□□□□□ -0.12
SGMS1-202ENST00000361781 CLMNQ96JQ2 1002 aa14.27□□□□□ -0.12
SGMS1-202ENST00000361781 MOV10L1Q9BXT6 1211 aaKnown RBP14.27□□□□□ -0.12
SGMS1-202ENST00000361781 FAM49BQ9NUQ9 324 aa14.27□□□□□ -0.12
SGMS1-202ENST00000361781 ASNSD1Q9NWL6 643 aa14.27□□□□□ -0.12
SGMS1-202ENST00000361781 CREB3O43889 395 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 EDF1O60869 148 aaKnown RBP14.27□□□□□ -0.13
SGMS1-202ENST00000361781 USP1O94782 785 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 CETPP11597 493 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 ENO3P13929 434 aaPredicted RBP14.27□□□□□ -0.13
SGMS1-202ENST00000361781 GPC3P51654 580 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 SLC12A2P55011 1212 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 RPL10AP62906 217 aaKnown RBP14.27□□□□□ -0.13
SGMS1-202ENST00000361781 MAMLD1Q13495 774 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 DBN1Q16643 649 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 RNF43Q68DV7 783 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 MFSD5Q6N075 450 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 ALYREFQ86V81 257 aaKnown RBP14.27□□□□□ -0.13
SGMS1-202ENST00000361781 SNED1Q8TER0 1413 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 ATP9BO43861 1147 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 EXTL3O43909 919 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 GPC4O75487 556 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 PDK4Q16654 411 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 TCHHL1Q5QJ38 904 aaPredicted RBP14.27□□□□□ -0.13
SGMS1-202ENST00000361781 ZDHHC14Q8IZN3 488 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 TRIML2Q8N7C3 387 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 NETO2Q8NC67 525 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 OR6B3Q8NGW1 331 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 PRPF31Q8WWY3 499 aaKnown RBP14.27□□□□□ -0.13
SGMS1-202ENST00000361781 STRIP2Q9ULQ0 834 aa14.27□□□□□ -0.13
SGMS1-202ENST00000361781 C4AP0C0L4 1744 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 C4BP0C0L5 1744 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 ROBO3Q96MS0 1386 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 ZMPSTE24O75844 475 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 SNUPNO95149 360 aaKnown RBP14.26□□□□□ -0.13
SGMS1-202ENST00000361781 SDC4P31431 198 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 AP1B1Q10567 949 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 RIPK1Q13546 671 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 MAP3K21Q5TCX8 1036 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 KRT80Q6KB66 452 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 FOXR2Q6PJQ5 311 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 NPNTQ6UXI9 565 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 ICA1LQ8NDH6 482 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 ALKBH8Q96BT7 664 aaKnown RBP14.26□□□□□ -0.13
SGMS1-202ENST00000361781 Q9H521 79 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 CISHQ9NSE2 258 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 NMRK1Q9NWW6 199 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 ADA2Q9NZK5 511 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 STARD13Q9Y3M8 1113 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 MYH3P11055 1940 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 GOLGA8QA0A0J9YX86 632 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 GOLGA8OA6NCC3 632 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 GOLGA8NF8WBI6 632 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 CFHP08603 1231 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 TPD52P55327 224 aaPredicted RBP14.26□□□□□ -0.13
SGMS1-202ENST00000361781 SLC34A1Q06495 639 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 POLNQ7Z5Q5 900 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 DAW1Q8N136 415 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 AGO4Q9HCK5 861 aaKnown RBP14.26□□□□□ -0.13
SGMS1-202ENST00000361781 ZNF70Q9UC06 446 aaPredicted RBP14.26□□□□□ -0.13
SGMS1-202ENST00000361781 KIF13AQ9H1H9 1805 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 VIL1P09327 827 aaKnown RBP14.26□□□□□ -0.13
SGMS1-202ENST00000361781 KCNA4P22459 653 aa14.26□□□□□ -0.13
SGMS1-202ENST00000361781 GLRA2P23416 452 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms