RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 ROR2Q01974 943 aaKnown RBP13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM81AQ8TBF8 368 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 AFG1LQ8WV93 481 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 ATG4AQ8WYN0 398 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 MAGED4Q96JG8 741 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 DEPDC7Q96QD5 511 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 ROGDIQ9GZN7 287 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 CPDO75976 1380 aa13.93□□□□□ -0.18
CCDC144A-203ENST00000360495 PIPSLA2A3N6 862 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 GSG1L2A8MUP6 293 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 MYBP10242 640 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ALOX12P18054 663 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 SGO1Q5FBB7 561 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 SEL1L3Q68CR1 1132 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ADGRF4Q8IZF3 695 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ACTRT1Q8TDG2 376 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ATXN2LQ8WWM7 1075 aaKnown RBP13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 FAR2Q96K12 515 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 LOC102724428A0A0B4J2F2 783 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 SIK1P57059 783 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 HERVK_113P62684 666 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 NFX1Q12986 1120 aaKnown RBP13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 TBCELQ5QJ74 424 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 MIGA2Q7L4E1 593 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 USP13Q92995 863 aaPredicted RBP13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 GCNAQ96QF7 691 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 GRIP2Q9C0E4 1043 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 SYTL2Q9HCH5 934 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 TUFT1Q9NNX1 390 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 LATS2Q9NRM7 1088 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 RGS7P49802 495 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 EPHA7Q15375 998 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 WDR72Q3MJ13 1102 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 DENND1BQ6P3S1 775 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 C4orf22Q6V702 233 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 CENPLQ8N0S6 344 aaPredicted RBP13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 SEPT1Q8WYJ6 367 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 PAFAH2Q99487 392 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 TRPC7Q9HCX4 862 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 A0A087X0T9 212 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM228BP0C875 321 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 PLIN5Q00G26 463 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 TRAF2Q12933 501 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 NCF4Q15080 339 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ATPAF2Q8N5M1 289 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 UBASH3BQ8TF42 649 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 VTA1Q9NP79 307 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ARHGEF3Q9NR81 526 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 TSPAN9O75954 239 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 KRT6BP04259 564 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 KRT6CP48668 564 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 CCT3P49368 545 aaKnown RBP13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 IL5RAQ01344 420 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ITGADQ13349 1161 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM83EQ2M2I3 478 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 MFSD4BQ5TF39 518 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 TRIQKQ629K1 86 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ELOA2Q8IYF1 753 aaPredicted RBP13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 VPS37AQ8NEZ2 397 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 NAGPAQ9UK23 515 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 ADAM30Q9UKF2 790 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 PCDHB2Q9Y5E7 798 aa13.92□□□□□ -0.18
CCDC144A-203ENST00000360495 TM9SF1O15321 606 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 PECAM1P16284 738 aaPredicted RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 NUP62P37198 522 aaPredicted RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 NFYCQ13952 458 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 TCHHL1Q5QJ38 904 aaPredicted RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 BTBD8Q5XKL5 378 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 FAM45BPQ6NSW5 357 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 ARL10Q8N8L6 244 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 APPL2Q8NEU8 664 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 KLHL3Q9UH77 587 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 EIF2S1P05198 315 aaKnown RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 IGKV5-2P06315 115 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 TALDO1P37837 337 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 DGUOKQ16854 277 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 MKNK1Q9BUB5 465 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 ZNF341Q9BYN7 854 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 INTS13Q9NVM9 706 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 PRDX5P30044 214 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 ZNF618Q5T7W0 954 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 KLHL17Q6TDP4 642 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 ZNF668Q96K58 619 aaPredicted RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 MYLK2Q9H1R3 596 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 CYP39A1Q9NYL5 469 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 CLOCKO15516 846 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 TPD52L2O43399 206 aaKnown RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 SOAT1P35610 550 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 MAPK10P53779 464 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 RAD23AP54725 363 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 PDK1Q15118 436 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 SNRNP35Q16560 246 aaKnown RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 PDZK1Q5T2W1 519 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 C1orf131Q8NDD1 294 aaKnown RBP13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 FEZF2Q8TBJ5 459 aa13.91□□□□□ -0.18
CCDC144A-203ENST00000360495 AGAP11Q8TF27 550 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms