RNA–Protein interactions for RNA: ENST00000355612.6

KRT39-201, Transcript of keratin 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT39, Length 1,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-201ENST00000355612 KRT17Q04695 432 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 INCA1Q0VD86 236 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 SREBF2Q12772 1141 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 TUBB8Q3ZCM7 444 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 CEP85LQ5SZL2 805 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 CYP4A22Q5TCH4 519 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 RGMBQ6NW40 437 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 TTC27Q6P3X3 843 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 WDTC1Q8N5D0 677 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 BEST2Q8NFU1 509 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 CXorf38Q8TB03 319 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 GIPC2Q8TF65 315 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 KAT2BQ92831 832 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 KHSRPQ92945 711 aaKnown RBP eCLIP6.9□□□□□ -1.3
KRT39-201ENST00000355612 SNX27Q96L92 541 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 CCDC114Q96M63 670 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 HEXIM2Q96MH2 286 aaKnown RBP6.9□□□□□ -1.3
KRT39-201ENST00000355612 TSPAN18Q96SJ8 248 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 OSMRQ99650 979 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 OSBPL8Q9BZF1 889 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 ELOVL4Q9GZR5 314 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 SDCBP2Q9H190 292 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 NMRK2Q9NPI5 230 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 ZDHHC18Q9NUE0 388 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 FLRT1Q9NZU1 646 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 WHRNQ9P202 907 aa6.9□□□□□ -1.3
KRT39-201ENST00000355612 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.9□□□□□ -1.3
KRT39-201ENST00000355612 TCRBV5S1A1TA0A578 114 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 ERICH4A6NGS2 130 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 SIGLEC16A6NMB1 481 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 GOLGA8SH3BPF8 625 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 HAS3O00219 553 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 KPNA6O60684 536 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 PPFIA2O75334 1257 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 MICAL2O94851 1124 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 TJP3O95049 919 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 GJB6O95452 261 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 KRT14P02533 472 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 KRT7P08729 469 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 SLC10A3P09131 477 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 NUDT7P0C024 238 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 KRT3P12035 628 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 AKR1A1P14550 325 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 TCF3P15923 654 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 PSMA2P25787 234 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 HOXA11P31270 313 aaPredicted RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 RPL21P46778 160 aaKnown RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 NDST1P52848 882 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 SNX16P57768 344 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 CAV1Q03135 178 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 LMNB2Q03252 620 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 IFFO1Q0D2I5 559 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 NFX1Q12986 1120 aaKnown RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 PDCLQ13371 301 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 SNX1Q13596 522 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 PTK6Q13882 451 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 ZNF268Q14587 947 aaPredicted RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 SLMAPQ14BN4 828 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 CNGA2Q16280 664 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 CCNG2Q16589 344 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 CCL14Q16627 93 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 FSCN1Q16658 493 aaKnown RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 HADHQ16836 314 aaKnown RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 PTPN20Q4JDL3 420 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 TTMPQ5BVD1 217 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 DAB2IPQ5VWQ8 1189 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 DENND2CQ68D51 928 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 C17orf99Q6UX52 265 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 POLNQ7Z5Q5 900 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 CROCCP2Q86T23 111 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 HOOK3Q86VS8 718 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 ZDHHC14Q8IZN3 488 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 TNS4Q8IZW8 715 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 NME8Q8N427 588 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 LRRC52Q8N7C0 313 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 C7orf31Q8N865 590 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 BBOF1Q8ND07 529 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 ATL2Q8NHH9 583 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 C1orf54Q8WWF1 131 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 DNAJB3Q8WWF6 145 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 PIK3R5Q8WYR1 880 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 USP6NLQ92738 828 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 LENG1Q96BZ8 264 aaPredicted RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 SNF8Q96H20 258 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 ATP6V1G3Q96LB4 118 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 ZNF560Q96MR9 790 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 SLITRK1Q96PX8 696 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 DCLK3Q9C098 648 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 TSPYL1Q9H0U9 437 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 SNTG2Q9NY99 539 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 GRHL1Q9NZI5 618 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 HMGXB4Q9UGU5 601 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 ASIC3Q9UHC3 531 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 UBQLN1Q9UMX0 589 aaKnown RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 PIN4Q9Y237 131 aaKnown RBP6.9□□□□□ -1.31
KRT39-201ENST00000355612 ATP8A1Q9Y2Q0 1164 aa6.9□□□□□ -1.31
KRT39-201ENST00000355612 CASP8AP2Q9UKL3 1982 aa6.89□□□□□ -1.31
KRT39-201ENST00000355612 M0QZ92 97 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms