RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ARHGEF26Q96DR7 871 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 PKNOX2Q96KN3 472 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 INPP4AQ96PE3 977 aaPredicted RBP14.34□□□□□ -0.11
SMC6-201ENST00000351948 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 AAASQ9NRG9 546 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 NEU2Q9Y3R4 380 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 ASTN1O14525 1302 aa14.34□□□□□ -0.11
SMC6-201ENST00000351948 FZD9O00144 591 aa14.33□□□□□ -0.11
SMC6-201ENST00000351948 KPNA2P52292 529 aaKnown RBP14.33□□□□□ -0.11
SMC6-201ENST00000351948 DRP2Q13474 957 aa14.33□□□□□ -0.11
SMC6-201ENST00000351948 LONRF1Q17RB8 773 aa14.33□□□□□ -0.11
SMC6-201ENST00000351948 KLHL38Q2WGJ6 581 aa14.33□□□□□ -0.11
SMC6-201ENST00000351948 SLC2A14Q8TDB8 520 aa14.33□□□□□ -0.11
SMC6-201ENST00000351948 RASSF4Q9H2L5 321 aa14.33□□□□□ -0.11
SMC6-201ENST00000351948 PMPCBO75439 489 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 PPARGP37231 505 aaPredicted RBP14.33□□□□□ -0.12
SMC6-201ENST00000351948 ARSHQ5FYA8 562 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 KLF6Q99612 283 aaPredicted RBP14.33□□□□□ -0.12
SMC6-201ENST00000351948 MAGEB5Q9BZ81 275 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 SMPD4Q9NXE4 827 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 ITGA11Q9UKX5 1188 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 RGPD2P0DJD1 1756 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 CCDC130P13994 396 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 MX2P20592 715 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 STX1BP61266 288 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 KYNUQ16719 465 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 FAM110CQ1W6H9 321 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 MTHFD1LQ6UB35 978 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 ZNF410Q86VK4 478 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 CD99L2Q8TCZ2 262 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 CAPNS2Q96L46 248 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 SMYD3Q9H7B4 428 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 DCTN4Q9UJW0 460 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 SCAMP3O14828 347 aaKnown RBP14.33□□□□□ -0.12
SMC6-201ENST00000351948 EPHB6O15197 1021 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 NFKBIAP25963 317 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 CD52P31358 61 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 MTMR14Q8NCE2 650 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 MTMR8Q96EF0 704 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 PITPNM3Q9BZ71 974 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 DYRK4Q9NR20 520 aa14.33□□□□□ -0.12
SMC6-201ENST00000351948 KPNA7A9QM74 516 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 ADIGQ0VDE8 80 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 FIGNQ5HY92 759 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 SLC13A5Q86YT5 568 aaPredicted RBP14.32□□□□□ -0.12
SMC6-201ENST00000351948 ABRAQ8N0Z2 381 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 CNOT10Q9H9A5 744 aaKnown RBP14.32□□□□□ -0.12
SMC6-201ENST00000351948 GTSE1Q9NYZ3 720 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 ZC3H7BQ9UGR2 993 aaKnown RBP14.32□□□□□ -0.12
SMC6-201ENST00000351948 BARX2Q9UMQ3 279 aaPredicted RBP14.32□□□□□ -0.12
SMC6-201ENST00000351948 MAFO75444 373 aaPredicted RBP14.32□□□□□ -0.12
SMC6-201ENST00000351948 MBL2P11226 248 aaPredicted RBP14.32□□□□□ -0.12
SMC6-201ENST00000351948 NBPF20Q3BBV1 942 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 ZNF280DQ6N043 979 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 TRIM42Q8IWZ5 723 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 PGBD3Q8N328 593 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 TRAIPQ9BWF2 469 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 CFLARO15519 480 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 SPARCL1Q14515 664 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 DDX50Q9BQ39 737 aaKnown RBP14.32□□□□□ -0.12
SMC6-201ENST00000351948 CDT1Q9H211 546 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 COL1A1P02452 1464 aaPredicted RBP14.32□□□□□ -0.12
SMC6-201ENST00000351948 MROH7Q68CQ1 1323 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 SLC12A8A0AV02 714 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 FKTNO75072 461 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 ITGA8P53708 1063 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 MYBPC2Q14324 1141 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 OR5B17Q8NGF7 314 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 ASB7Q9H672 318 aa14.32□□□□□ -0.12
SMC6-201ENST00000351948 H0Y626 953 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 ST8SIA6P61647 398 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 CDH18Q13634 790 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 FASTKD1Q53R41 847 aaKnown RBP14.31□□□□□ -0.12
SMC6-201ENST00000351948 BOLA3Q53S33 107 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 LHX1P48742 406 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 OCRLQ01968 901 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 CLEC16AQ2KHT3 1053 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 EGFL8Q99944 293 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 APOL2Q9BQE5 337 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 CEP41Q9BYV8 373 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 HOXA2O43364 376 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 SNX2O60749 519 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 DNAJC6O75061 913 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 C4orf33Q8N1A6 199 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 TTC8Q8TAM2 541 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 GIPC2Q8TF65 315 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 CLEC4DQ8WXI8 215 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 ADAM21Q9UKJ8 722 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 TPX2Q9ULW0 747 aaKnown RBP14.31□□□□□ -0.12
SMC6-201ENST00000351948 NFASCO94856 1347 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 IGKV6D-41A0A0C4DH26 115 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 ATICP31939 592 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 GTF2BQ00403 316 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 PDK1Q15118 436 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 LRRC55Q6ZSA7 311 aa14.31□□□□□ -0.12
SMC6-201ENST00000351948 GTPBP10A4D1E9 387 aaKnown RBP14.3□□□□□ -0.12
SMC6-201ENST00000351948 PRR23AA6NEV1 266 aa14.3□□□□□ -0.12
SMC6-201ENST00000351948 DDX3XO00571 662 aaKnown RBP eCLIP14.3□□□□□ -0.122e-8■■■■□ 24.4
SMC6-201ENST00000351948 BDNFP23560 247 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms